Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi141g00070 ATGGAAAAATTGAATTTTGTTAAAAATGGAGTATGCAGATTGCCTCCTGGTTTTCGTTTCCAGCCAACAGATGAAGAGCTTGTCTTTCAATACTTGAAATGTAAGATCTTCTCATGCCAATTGCCTGCTTCAATCATTCCTGAGATCAATGTCTGCAAGTACGATCCTTGGGATTTGCCAGGAAATTGTTATCAGCAAGAGAGGTACTTTTTCAGCTCTAAGGAAACTAAGTATCGAAATGGCAATCGTATGAACAGAACAACCAACTCTGGCTATTGGAAGGCAACAGGATCAGACAAAAAAATTTCACCACCAATAACTAGTGATTGTATTGCAGGGATAAGAAAAACTCTGGTATTCTATGAAGGGAAATCTCCAAATGGGTCTCGAACTGATTGGATCATGCATGAATATCGCCTTGTTAATGTAGAAACTATTGCTTGCAATTCATCCCAGAACTATGTAAACGAGATAGGGGATTGGGTACTCTGTCGCATATTCATGAAGAAAAGAAGTATAGAAATTGATGACAACACTGCTACCATGCTGAAGAAGAAAAATAGAGTGATGAATGTTCAGGGGACTCACCCAAGATTCTTTGATTTTATGAGGGTACACAAGTCAACTCCGGGTCCTATCCATTTTTCTAATTCTATCACATCCTCATCTTGTTCAAGTTCCAGTGACATTTTAGAGATATCTTCATCAGACCATGAAGAAACAATCGGCTATGCTGATTATTAA 744 0.3817 MEKLNFVKNGVCRLPPGFRFQPTDEELVFQYLKCKIFSCQLPASIIPEINVCKYDPWDLPGNCYQQERYFFSSKETKYRNGNRMNRTTNSGYWKATGSDKKISPPITSDCIAGIRKTLVFYEGKSPNGSRTDWIMHEYRLVNVETIACNSSQNYVNEIGDWVLCRIFMKKRSIEIDDNTATMLKKKNRVMNVQGTHPRFFDFMRVHKSTPGPIHFSNSITSSSCSSSSDILEISSSDHEETIGYADY 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi141g00070 247 Pfam No apical meristem (NAM) protein 15 140 IPR003441 GO:0003677|GO:0006355
Sebi141g00070 247 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 213 - -
Sebi141g00070 247 Gene3D NAC domain 23 174 IPR036093 GO:0003677|GO:0006355
Sebi141g00070 247 SUPERFAMILY NAC domain 10 169 IPR036093 GO:0003677|GO:0006355
Sebi141g00070 247 ProSiteProfiles NAC domain profile. 14 169 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi141g00070 Sebi-Chr141 1511103 1512482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi141g00070 1 241 NAC Transcription Factor Family AT5G13180 51.163 1.32e-73 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi141g00070 NAM 2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi141g00070 - - aprc:113868555 364.77