Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi141g00041 ATGAACTGGCCAACATGGAAGTCCAACACCATGCCAATGGCTTTGGTGTTGTTGCTTAGTTTTTCCTTGGAGGTGTTCTGTCTCTCTTCTCATGCTGATAGAATTGTTTGGCTTCCTGGGCAACCCCATGTAGATTTTCAACAATTCTCAGGATATGTCACAGTAGATGACAAGAAACACAAGTCTCTTTTTTACTATTTTGTTGAATCAGAAATTGATCCTGCTTCAAAACCTCTGGTTCTCTGGCTCAATGGAGGACCTGGTTGTTCTTCTCTTGGAGTTGGTGCATTCTCTGAAAATGGACCCTTTAGACCAAATGGGGAGTTTTTGATTAAAAATGAGTTTAGTTGGAACAAAGAGGCAAATATGCTGTATTTGGAGACACCAATTGGAGTGGGGTTCTCTTATGCTAAAGGTAGCTCCTCCTATATGACAGTGAATGACGAAGTAACAGCTAGGGACAATCTTGTATTCCTGCAACGCTGGTTCAACAAGTTCCCCCAATATAGGAACAGAGATTTGTTTCTAACAGGAGAAAGTTATGCAGGTCATTATGTTCCTCAACTTGCAAAGCTAATGATTGAAATGAACACAAAGAACAAGATGTTCAATCTGAAAGGCATAGCTTTGGGTAATCCAGTTCTAGAATATGCCACTGATTTCAATTCAAGGGCTGAGTTCTTCTGGTCTCATGGACTAATATCAGATTCAACATACAACATGTTCACTACAGTGTGTAATTACTCTCGGTATGTCAGTGAGTACTATAGAGACTCAGTTTCACCTCTTTGTTCAAAGGTTATGGGGCAAGTGAGCAAAGAAACTAGTAAATTTGTGGACAAATATGATGTCACCCTTGATGTTTGCATTTCCTCAGTGCTATCACAATCCAAGGTTATTTGTCCTCAAACTCAACAAGCAAATGAGAGGATAGATGTGTGTGTAGATGACAAGGTTACAAACTACTTAAACAGGAAAGATGTACAAGAAGCACTTCATGCAAAGCTTGTTGGAGTTCGCAACATACTGGACTATGATATGCTCAATTTGGAAGTCCCTACACTTCCTGTTGTTGGATCACTGATAAAGGCTGGAGTTCGGGTCTTAATTTACAGTGGAGATCAAGATTCAGTAATTCCACTGACTGGAAGCCGCACCTTAGTTCAAAAGTTGGCAAGAAAATTAGGACTAAATACAACAGTTCCTTACAGAGTATGGTTTGAAGGCCAGCAGGTTGGTGGATGGACTCAAGTTTATGACAATATCCTTTCATTTGCCACTGTTAGAGGTGCCTCCCATGAAGCCCCTTTCTCACAGCCTGAAAGATCACTAGTGCTATTCAAGTCATTCTTGAAAGGCAGGCCTTTGCCTGAATTTTTCTGA 1383 0.4056 MNWPTWKSNTMPMALVLLLSFSLEVFCLSSHADRIVWLPGQPHVDFQQFSGYVTVDDKKHKSLFYYFVESEIDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEFLIKNEFSWNKEANMLYLETPIGVGFSYAKGSSSYMTVNDEVTARDNLVFLQRWFNKFPQYRNRDLFLTGESYAGHYVPQLAKLMIEMNTKNKMFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYNMFTTVCNYSRYVSEYYRDSVSPLCSKVMGQVSKETSKFVDKYDVTLDVCISSVLSQSKVICPQTQQANERIDVCVDDKVTNYLNRKDVQEALHAKLVGVRNILDYDMLNLEVPTLPVVGSLIKAGVRVLIYSGDQDSVIPLTGSRTLVQKLARKLGLNTTVPYRVWFEGQQVGGWTQVYDNILSFATVRGASHEAPFSQPERSLVLFKSFLKGRPLPEFF 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi141g00041 460 ProSitePatterns Serine carboxypeptidases, histidine active site. 423 440 IPR033124 GO:0004185
Sebi141g00041 460 SUPERFAMILY alpha/beta-Hydrolases 39 457 IPR029058 -
Sebi141g00041 460 Pfam Serine carboxypeptidase 40 453 IPR001563 GO:0004185|GO:0006508
Sebi141g00041 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Sebi141g00041 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Sebi141g00041 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Sebi141g00041 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 423 436 IPR001563 GO:0004185|GO:0006508
Sebi141g00041 460 Gene3D - 314 341 - -
Sebi141g00041 460 FunFam Carboxypeptidase 354 453 - -
Sebi141g00041 460 FunFam Carboxypeptidase 28 457 - -
Sebi141g00041 460 Gene3D alpha/beta hydrolase 30 291 IPR029058 -
Sebi141g00041 460 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Sebi141g00041 460 Gene3D - 354 453 - -
Sebi141g00041 460 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 440 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi141g00041 Sebi-Chr141 978650 981771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi141g00041 322 456 Calmodulin-binding Proteins AT2G22960 27.660 1.15e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi141g00041 K16297 - gmx:100795668 847.81