Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi141g00011 ATGGATCCGGACGCATTCACCGCCAGCCTATTCAAGTGGGACCCGCGCACCGTCCTTCCACCTCCCGCGGCCACACGTCCCCCTCTCCTCGACTACGCGGTTGCTCCGCCAGTGGCCGCGACGGCGGCGTATCATCCGGCGAGAGCGCCGAGGGAGTTGGAGGAACTGTTCCAAGCTTACGGCATCAGATACTACACGGCGGCGAAGATAGCGGAGCTTGGTTTCACGGCGAGCACGCTGGTGGACATGAAGGACGAGGAGTTGGACGACATGATGAACAGCCTCTCCCAGATTTTCCGATGGGATCTCCTCGTCGGCGAGCGTTACGGCATCAAAGCCGCCGTCAGAGCCGAACGAAGACGCGTCGACGACGAGGACATGAAGCGCCGTAACCTCCTCTCCACCGACACAACCACCAACGCACTCGATGCTCTCTCTCAAGAAGGTTTGTCGGAGGAGCCGGTGGTGCAACGAGAAAGGGAGGTAGTGGGAAGCGGGGAGGGAGCACGTGGGAGTGGTGGTGGTGGTTGTGAGAGGCAAAGAGAGCATCCATTCATTGTGACTGAGCCTGGGGAGGTTGCACGTGGCAAGAAGAATGGTCTTGACTATCTCTTTCACCTCTACGAGCAATGCCGTGAGTTCTTGATCCAGGTTCAGGCCATCGCCAAGGACCGCGGTGAAAAATGCCCAACCAAGGTGACAAATCAGGTATTTAGGTACGCGAAGAAGGCTGGAGCTAGCTACATCAACAAGCCGAAAATGCGACACTACGTGCATTGCTACGCGTTGCATTGTCTTGACGAGGAGGTGTCAAATGAGCTGAGAAGGGGTTTCAAGGAGAGAGGGGAGAATGTAGGAGCATGGAGGCAAGCTTGTTACAAGCCCCTTGTGGCCATAGCAGCACGTCAAGGTTGGGACATTGATGCCATATTCAATGCGCATCCTCGTCTTTCCATATGGTATGTGCCAACAAAGCTCCGTCAGCTTTGTCATGCCGAGAGGAACAGCGCCGCCGCTTCTAGCTCCGTCTCTGTGGCAGCGGCCACCTTCCGTTCTAAAACTGTACTGATCTTGTAA 1077 0.5636 MDPDAFTASLFKWDPRTVLPPPAATRPPLLDYAVAPPVAATAAYHPARAPRELEELFQAYGIRYYTAAKIAELGFTASTLVDMKDEELDDMMNSLSQIFRWDLLVGERYGIKAAVRAERRRVDDEDMKRRNLLSTDTTTNALDALSQEGLSEEPVVQREREVVGSGEGARGSGGGGCERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQAIAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRRGFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNSAAASSSVSVAAATFRSKTVLIL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi141g00011 358 Gene3D Protein LEAFY 175 344 IPR038276 -
Sebi141g00011 358 PANTHER PROTEIN LEAFY 1 346 IPR002910 GO:0003677|GO:0006355
Sebi141g00011 358 Pfam Floricaula / Leafy protein SAM domain 50 126 IPR035079 -
Sebi141g00011 358 MobiDBLite consensus disorder prediction 149 180 - -
Sebi141g00011 358 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 172 338 IPR035209 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi141g00011 Sebi-Chr141 286992 289036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi141g00011 1 349 Orphan Transcription Factor Family AT5G61850 62.103 1.15e-155 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Sebi141g00011 C_LFY_FLO 1.8e-109 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi141g00011 - - gmx:100799720 549.28