Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi140g00041 ATGATCAATAATGCAAATGTTTCAGATGATATTCAATATCTATCCAATGAGCTAAGATTAATTGATTGGCCGGGGTACCCTTCTTCAACTCTACCACCAGATTTCCATCCAAAGAGACTTGTTTCTTTAAATATGAGTCATAGTCGCATCAAACACTTGTGGAAGGGAGCTAAGATATTCAAAGACTTGAAACTTGTATCCTTTAGCTGCTGTCAATACCTCACTGAAATACCAGACTTCTCAATGATTCCAAACCTTGAGAATCTCAGCTTGGACCATTGTAAAAGTTTAACTAAGGTGCATGAGTCTGTGGGGTCTCTTGATAAGCTTGTTACTTTAAACTTCCTATTATGCTCCAATCTCAAGGCTCTTCCAAGTCATTTCAAGTTAAAATCTCTACGTACTCTCCTCCTCACTGGCTGCTCAAAGGTTAGAAAGTTTCCTGAGATTGTTGACAAAATGGAACATCTTGAAGAAATCCTTCTCCAAGGGACTTCCATTAAAGAACTACCACAATCAATTGAACATCTAATTGGGCTAAAAGTGTTACTCTTAGATTCTTGCCAAAAGCTTGAGCATCTTCCAAGTAGCATTCAGAATTTGCAATACCTTACTGAACTTGATCTCACTAACTGCTCAAAGCTCAGGGAGCTTCCAAAGCTTCCACTAAATACAAGATATATAGACATAAATAATTGCAGATCATTGGAAAGGTTTCCAACATTGTCCTTCCAATCAAATTTTAGTGCAGAGGAATTCCCAAGGTTTTCTCAAATGATGTTCATTAACTGCCATAAACTGATTAATAAACAAGTCCAGGAGCACATAACAAATCTGTTTTACAATGAGGAATTTATTAAAGAAGTTATGCTTCCAGGGAACAGTATCCCAGATTGGTTTCATCATCAGAGTACTAATGGTTCAATTTCTATTGAGGTAGCTTCAAGATTGTATGGTAAGCCTGTGGAGTTGTTTTTTGGTGCAGTTTTTGAGGTAGACAAAGGTGCTACAAAAACTGGTATATTTTCATGTGTATATGAGGATCAATCCTGGTCGTTTGATGTGGGGCCTTAA 1074 0.3724 MINNANVSDDIQYLSNELRLIDWPGYPSSTLPPDFHPKRLVSLNMSHSRIKHLWKGAKIFKDLKLVSFSCCQYLTEIPDFSMIPNLENLSLDHCKSLTKVHESVGSLDKLVTLNFLLCSNLKALPSHFKLKSLRTLLLTGCSKVRKFPEIVDKMEHLEEILLQGTSIKELPQSIEHLIGLKVLLLDSCQKLEHLPSSIQNLQYLTELDLTNCSKLRELPKLPLNTRYIDINNCRSLERFPTLSFQSNFSAEEFPRFSQMMFINCHKLINKQVQEHITNLFYNEEFIKEVMLPGNSIPDWFHHQSTNGSISIEVASRLYGKPVELFFGAVFEVDKGATKTGIFSCVYEDQSWSFDVGP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi140g00041 357 SUPERFAMILY L domain-like 4 245 - -
Sebi140g00041 357 Pfam C-JID domain 291 318 IPR045344 -
Sebi140g00041 357 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 7 160 - -
Sebi140g00041 357 Gene3D Ribonuclease Inhibitor 128 281 IPR032675 -
Sebi140g00041 357 Gene3D Ribonuclease Inhibitor 3 127 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi140g00041 Sebi-Chr140 1244044 1245563 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi140g00041 11 219 WRKY Transcription Factor Family AT4G12020 40.553 1.34e-36 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi140g00041 - - lja:Lj2g3v0604110.1 598.201