Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi13g00288 ATGGATCTCTTAATTGAGTATCAGCACGCAGCGATAGCCGTAGCTGTTGGCATACTATTGATTTCTTACATCACGAAAAGGACTGGATCAGCAGCAGCACGACGAAACACACCACCCGTAGCTACTGGTGGGTGGCCTTTGATCGGTCACCTTCCCCTGTTAGGTGGTTCAGGTGGTCAACCTCCTTACATAGCCTTAGGAGCCTTAGCAGACAAGTACGGACCCATCTTCAGCATCCGAATCGGAGTGCACCCTGCTGTGGTCGTCAGTACTTGGGAGCTAGCCAAGGAGATTTTCACCACTCACGATCTCATCATCTCCTCTCGTCCCAAATTCACCGCAGCCAAAATATTGGGACACGACTACGCTAACTTCGGCTTCTCCCCTTACGGAGAATACTGGCGCGTCATGCGTAAGGTAACCGCCTCGGAGCTTCTCTCCACGCGCCGCTTAGAATCCTTTCGGGATATTAGGGATTCCGAGGTGAAGAGCTGGGTGGAAGAGCTCTACAGCGCGTGGGGGAGGGACAAAAGTGGTGGTGGTGATTTCGTGGTGGAGATGAAGAAGTGGTTTGGGGATTTGAATTTGAACGTGATTTTAAGGATGGTTGCTGGGAAGCGATACAAATTAAGTGGAAGTACGGATGAGATTGAGAGAGAGGTGCGGAGGGTGAGGAGGGTTTTCAGAGAGTGGTTTCGTTTGACAGGGTTGTTTGTGGTTGGCGACGCGATCCCTTTTCTTGGATGGCTTGATTTGGGAGGACATGTGAAGGAGATGAAGAAAACCGCTGTGGAAATGGAAAGCGTGATTTGTGAATGGTTAGAAGAACATCGCAGAAAGAGAGATTCAGGGGAGACTAATAAAACAGAGCAGGATTTTATTGATGTGTTGATGTCTGTACTTGGTAGCGCTGATCTTGCTGGTTATGACGTTGATACCGCCATCAAATCCACGTGTTTGACGCTAATTGCTGGAGGAACGGATACTACAGCGGTTACTATGACATGGGCGCTATCGTTATTGTTGAATAATCGCCATGCTTTGAAGAAAGTTCAAGAGGAGCTAGATGAGCAAGTGGGTAAGGAAAGACTTGTGAATGAATCAGATATCAACAACTTGGTTTATCTTCAAGGTGTAGTTAAAGAAACGCTACGATTGTATCCAGCTGGGCCACTAGGAGGTGCGCGTCAATTTTCTGAAGATCTTACTTTAGGTGGATACCATATCCAAGCAGGTACTCGAATGATTTTGAACCTTTGGAAGATGCATAGAGACCCACGTGTATGGTCAGATCCATTAGAGTTTAAACCTGAGAGGTTCTTGACTACCCATAAGGATGTGGATGTGAAGGGTAAGCATTTTGAGCTACTTCCCTTTGGTGGTGGAAGAAGGTCCTGCCCTGGCATATCATATGGCCTTCAAATGTCACACTTGGCATTAGCTGCTTTCTTGCAAGCATTTGAGATCACAACCCCCTCTAATGCCCAAGTTGATATGAGCGCCACGTTTGGACTCACGAACATCAAAACCACCCCACTTGAGATTTTGGCTAAACCTCGTTTACCATACCACCTTCTCTTTGTGGATCAACATCAACCTTAG 1602 0.4719 MDLLIEYQHAAIAVAVGILLISYITKRTGSAAARRNTPPVATGGWPLIGHLPLLGGSGGQPPYIALGALADKYGPIFSIRIGVHPAVVVSTWELAKEIFTTHDLIISSRPKFTAAKILGHDYANFGFSPYGEYWRVMRKVTASELLSTRRLESFRDIRDSEVKSWVEELYSAWGRDKSGGGDFVVEMKKWFGDLNLNVILRMVAGKRYKLSGSTDEIEREVRRVRRVFREWFRLTGLFVVGDAIPFLGWLDLGGHVKEMKKTAVEMESVICEWLEEHRRKRDSGETNKTEQDFIDVLMSVLGSADLAGYDVDTAIKSTCLTLIAGGTDTTAVTMTWALSLLLNNRHALKKVQEELDEQVGKERLVNESDINNLVYLQGVVKETLRLYPAGPLGGARQFSEDLTLGGYHIQAGTRMILNLWKMHRDPRVWSDPLEFKPERFLTTHKDVDVKGKHFELLPFGGGRRSCPGISYGLQMSHLALAAFLQAFEITTPSNAQVDMSATFGLTNIKTTPLEILAKPRLPYHLLFVDQHQP 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi13g00288 533 PANTHER CYTOCHROME P450 82C3-RELATED 16 525 - -
Sebi13g00288 533 CDD CYP82 74 520 - -
Sebi13g00288 533 Gene3D Cytochrome P450 29 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi13g00288 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Sebi13g00288 533 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi13g00288 533 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi13g00288 533 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi13g00288 533 FunFam Cytochrome P450 82C4 28 518 - -
Sebi13g00288 533 Pfam Cytochrome P450 38 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi13g00288 533 SUPERFAMILY Cytochrome P450 44 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi13g00288 533 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi13g00288 533 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi13g00288 533 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi13g00288 533 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi13g00288 533 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi13g00288 533 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi13g00288 533 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi13g00288 533 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi13g00288 533 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi13g00288 Sebi-Chr13 3412948 3414642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi13g00288 12 526 Cytochrome P450 AT4G31940 47.885 3.16e-175 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi13g00288 - - vvo:131604729 756.518