Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi13g00283 ATGGCTTCTGATGACATCTCATTTGAAGATCTCAAGAATGAGAATGTTGATCTTGAAAACATTCCAGTTGAGGAGGTCTTCAAGCAGCTAAAATGTAGTAGAGAGGGTCTTTCATCTGAGGATGGAGAGAAGAGGCTTCAAATTTTTGGCCCCAACAAGCTAGAGGAGAAAACGGAAAGCAAGTTCCTCAAGTTCTTGGGTTTTATGTGGAATCCTTTATCATGGGTTATGGAATCAGCTGCTATCATGGCCATTGTATTGGCCAATGGAGGGGGCAAGCCACCGGATTGGCAAGATTTCACTGGTATTGTTGTGTTGCTTATCATCAACTCAACCATCAGTTTCATTGAGGAAAACAATGCAGGCAATGCTGCAGCTGCTTTGATGGCTGGTCTTGCACCCAAAACCAAGGTTCTAAGGGATGGAAAATGGAGTGAGCAAGAGGCATCAATTTTGGTACCAGGAGATGTGATTAGCATCAAGTTGGGAGACATTGTCCCTGCTGATGCCCGTCTCTTGGAGGGTGATCCTCTCAAGATTGACCAATCTGCCCTCACTGGTGAGTCCTTGCCAGTCACAAGGCACCCTGGTAGTGAGGTCTTCTCTGGTTCCACTTGCAAACAAGGTGAGATTGAGGCTGTTGTCATTGCCACTGGTGTCCACACCTTCTTTGGTAAGGCTGCACACCTTGTAGACAGCACCAACAATGTTGGTCACTTCCAAAAGGTGTTGACATCCATTGGTAACTTCTGTATCTGCTCAATTGCTTTGGGCATGTTGGTTGAGATCATTGTCATGTACCCTATCCAGAACAGGGCTTACAGAGATGGTATTGACAATTTGTTGGTGCTTCTCATTGGAGGTATTCCAATTGCCATGCCAACTGTCTTGTCTGTGACCATGGCTATTGGATCTCACCGCCTATCTGAGCAAGGAGCCATCACTAAGAGGATGACAGCCATTGAGGAAATGGCAGGAATGGATGTTCTCTGCAGTGACAAAACTGGAACTCTCACCCTCAATAAGCTTTCAGTGGACAAGAACTTGATTGAGGTGTTTCCTGCTGGCTTGGACAAGGATGCCATTGTCTTATATTCTGCCAGGGCTTCTAGGACTGAAAACCAAGATGCCATTGATGCATCAATTGTGGGAATGTTGGGCGACCCCAAGGAGGCAAGAGCAGGAATCACTGAGGTGCATTTCTTGCCCTTCAATCCTGTGGACAAGCGCACAGCTATTACCTACATTGATAGCAATGGTGACTGGCACAGAAGCAGCAAAGGTGCTCCTGAGCAAATCATTGAGCTTTGTGCCCTCAAGGGAGAGACTTTGAAAAAGGCTCACAAAATCATTGATGAGTTTGCTGACCGTGGTCTGCGTTCCTTAGGTGTTGCTCGCCAGACTGTTTCAGCAAAGAACAAGGAGAGTGAAGGAGAACCATGGGAATTCTTGGGTCTCTTACCCCTCTTTGACCCTCCAAGGCATGACAGTGCTGAGACTATTCGCCGTGCTCTTGACCTTGGTGTCAATGTTAAGATGATCACCGGTGACCAACTTGCTATTGGGAAAGAAACTGGTCGCAGGCTTGGAATGGGAACCAACATGTACCCTTCATCCTCCCTTCTTGGCCAAAGTAAGGATGAGGCCATTGCATCAATCCCAATTGATGAACTCATTGAGAAGGCTGATGGCTTTGCTGGAGTCTTCCCTGAGCACAAGTATGAGATTGTGAAGAGGCTTCAGGATAGAAAACACATTTGTGGAATGACTGGAGATGGTGTGAATGATGCACCAGCACTCAAGAAGGCAGACATTGGTATTGCAGTGGCTGATGCAACTGATGCTGCTAGGAGTGCCTCAGATATTGTCTTGACTGAGCCTGGTCTCAGTGTGATTGTGAGTGCTGTGTTGACAAGCAGGGCCATCTTCCAGAGGATGAAGAACTACACAATCTATGCTGTTTCCATCACAATCCGTATTGTCCTTGGATTCTTGCTTGTTGCTTTAATATGGAAGTTTGACTTCTCTCCTTTCATGGTTTTGATCATTGCTATCTTGAATGATGGAACCATCATGACCATCTCTAAGGATAGGGTGAAGCCATCTCCTGTGCCTGACTCATGGAAGCTAAAGGAAATCTTTGCCACTGGAGTTGTTCTTGGAACTTACATGGCCATCATGACTGCAGTTTTCTTCTATGCTGTTCATGACACAGATTTCTTCACTAGACTTTTTGGTGTCCACTCAATTGCAGACAGTGAGGAGCAACTTAACTCAGCTCTCTACCTTCAAGTGAGTATCATTAGTCAGGCACTAATTTTTGTGACTAGATCAAGGAGCTGGTCATTTGTTGAACGCCCTGGCTTGATGCTTATTGGAGCCTTCATTGTTGCACAATTGCTTGCAACTATCATTGCTGTGTATGCACACTGGGACTTTGCTAGAATCAATGGAATTGGGTGGAACTGGGCTGGAGCAATCTGGGTCTACAGCATTGTTACATACATCCCTCTTGACATCCTCAAGTTTTTCATTCGCATGGGACTCACAGGCAGTGCTTGGGACAGCATGCTCCAAAACAAGACTGCATTCACAACAAAGAAAGACTATGGTAGGGAAGAGAGGGAGGCTCAATGGGCTGTGGCTCAACGCACAATGCATGGTCTTAAGGTTCCTGAAACACACAAGAGCAATCACCATGAGCAATCTGAAATTGCTGAGCAGGCCAAGAGACGTGCTGAGGCAGCTAGTTAA 2754 0.4611 MASDDISFEDLKNENVDLENIPVEEVFKQLKCSREGLSSEDGEKRLQIFGPNKLEEKTESKFLKFLGFMWNPLSWVMESAAIMAIVLANGGGKPPDWQDFTGIVVLLIINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTRHPGSEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTSIGNFCICSIALGMLVEIIVMYPIQNRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFPAGLDKDAIVLYSARASRTENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDSNGDWHRSSKGAPEQIIELCALKGETLKKAHKIIDEFADRGLRSLGVARQTVSAKNKESEGEPWEFLGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDEAIASIPIDELIEKADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLKEIFATGVVLGTYMAIMTAVFFYAVHDTDFFTRLFGVHSIADSEEQLNSALYLQVSIISQALIFVTRSRSWSFVERPGLMLIGAFIVAQLLATIIAVYAHWDFARINGIGWNWAGAIWVYSIVTYIPLDILKFFIRMGLTGSAWDSMLQNKTAFTTKKDYGREEREAQWAVAQRTMHGLKVPETHKSNHHEQSEIAEQAKRRAEAAS 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi13g00283 917 FunFam ATPase 4 plasma membrane-type 575 817 - -
Sebi13g00283 917 NCBIfam HAD-IC family P-type ATPase 103 350 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi13g00283 917 NCBIfam HAD-IC family P-type ATPase 565 677 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi13g00283 917 NCBIfam plasma-membrane proton-efflux P-type ATPase 36 808 IPR006534 GO:0008553|GO:0016020|GO:0120029
Sebi13g00283 917 SUPERFAMILY Calcium ATPase, transmembrane domain M 16 847 IPR023298 -
Sebi13g00283 917 PANTHER CALCIUM-TRANSPORTING ATPASE 19 885 - -
Sebi13g00283 917 SUPERFAMILY HAD-like 327 637 IPR036412 -
Sebi13g00283 917 CDD P-type_ATPase_H 36 843 IPR006534 GO:0008553|GO:0016020|GO:0120029
Sebi13g00283 917 Pfam haloacid dehalogenase-like hydrolase 327 604 - -
Sebi13g00283 917 SMART Cation_ATPase_N_a_2 17 89 IPR004014 -
Sebi13g00283 917 SFLD C1.7: P-type atpase like 313 642 - -
Sebi13g00283 917 Gene3D - 96 817 - -
Sebi13g00283 917 SFLD p-type atpase 313 642 IPR044492 -
Sebi13g00283 917 MobiDBLite consensus disorder prediction 891 917 - -
Sebi13g00283 917 Pfam Cation transporter/ATPase, N-terminus 20 83 IPR004014 -
Sebi13g00283 917 ProSitePatterns E1-E2 ATPases phosphorylation site. 333 339 IPR018303 -
Sebi13g00283 917 PRINTS P-type cation-transporting ATPase superfamily signature 331 345 - -
Sebi13g00283 917 PRINTS P-type cation-transporting ATPase superfamily signature 181 195 - -
Sebi13g00283 917 PRINTS P-type cation-transporting ATPase superfamily signature 613 625 - -
Sebi13g00283 917 PRINTS P-type cation-transporting ATPase superfamily signature 485 496 - -
Sebi13g00283 917 PRINTS P-type cation-transporting ATPase superfamily signature 590 609 - -
Sebi13g00283 917 PRINTS P-type cation-transporting ATPase superfamily signature 507 517 - -
Sebi13g00283 917 FunFam Plasma membrane ATPase 134 218 - -
Sebi13g00283 917 Gene3D - 328 627 IPR023214 -
Sebi13g00283 917 Gene3D - 134 218 - -
Sebi13g00283 917 PRINTS H+-transporting ATPase (proton pump) signature 447 465 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi13g00283 917 PRINTS H+-transporting ATPase (proton pump) signature 590 606 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi13g00283 917 PRINTS H+-transporting ATPase (proton pump) signature 621 646 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi13g00283 917 PRINTS H+-transporting ATPase (proton pump) signature 562 578 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi13g00283 917 PRINTS H+-transporting ATPase (proton pump) signature 762 783 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi13g00283 917 Coils Coil 906 917 - -
Sebi13g00283 917 FunFam Plasma membrane ATPase 484 638 - -
Sebi13g00283 917 Pfam E1-E2 ATPase 133 310 - -
Sebi13g00283 917 FunFam Plasma membrane ATPase 343 490 - -
Sebi13g00283 917 SUPERFAMILY Calcium ATPase, transduction domain A 134 231 IPR008250 -
Sebi13g00283 917 Gene3D - 343 490 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi13g00283 Sebi-Chr13 3341774 3346583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi13g00283 5 916 Primary Pumps ATPases AT3G42640 85.761 0.0 1597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi13g00283 K01535 - gmx:100798717 1625.53