Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi13g00270 ATGGCTTTCCATGACCATCTATCACACGAAATCACTTTTCAGCCTTTCACCGACGAGCAGCAGTTAAGTCAAAGCAGAGACATGCAGAGGATGCTACCACTCTCCGGCGGCGGCGGTGCGGCGCCGACGTGGCTCAACAACGCCGCCACACTTCGGCAGCAGAATTTCCTCCACTTGCAACCGGATCACTCGACGGCGCAAAACGACGACGTTCGAGGACTGATGGGAACATCAGAGAAAAACACGGATCGGAATCGGACGGAAAGCAACGCTGAATCGGAGGATTTAGCAGAATACAAAGCGGACATTTTAGGTCATCCTCTCTATGACCAGCTTCTTTCGGCTCACGTTTCGTGTTTGAGGATCGCCACACCGGTGGACCAGCTTCCACGGATCGATGCTCAGCTTCAACAATCGCAGCGCGTGGTGGACAAATACTCTGGCCTTGGGAATGGAGTGGTAGATGAGAAGGAGCTTGATCAATTCATGACGCATTATGTTTTACTTCTCTGCGCTTTTAAAGAGCAATTGCAACAGCATGTCCGTGTTCATGCCATGGAAGCTGTTATGGCTTGTTGGGAGCTCGAGCAATCTCTGCAAAGCTTGACCGGAACAGGTGTATCTCCCGGGGAAGGAACTGGTGCAACCATGTCAGACGATGAAGAAGACCAAGCAGAGAGCAATGCTAACTTATACGAAGCAAGTTTGGATGGCGCTGATAGTCTCAGCTTTGGCCCTCTTGTTCCCACTGAAAGGTTACAAGGAGAAGATCGTGGACATAAGAGAAGAAATTCTACGGAAGAGAAGAGCCGGGAAGCTCCCTGGGGATACCACTTCCCTTTTAAAAGCATGGTGGCAGTCACATTCTAA 870 0.5057 MAFHDHLSHEITFQPFTDEQQLSQSRDMQRMLPLSGGGGAAPTWLNNAATLRQQNFLHLQPDHSTAQNDDVRGLMGTSEKNTDRNRTESNAESEDLAEYKADILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLQQSQRVVDKYSGLGNGVVDEKELDQFMTHYVLLLCAFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGTGVSPGEGTGATMSDDEEDQAESNANLYEASLDGADSLSFGPLVPTERLQGEDRGHKRRNSTEEKSREAPWGYHFPFKSMVAVTF 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi13g00270 289 SMART KNOX1_2 97 141 IPR005540 GO:0003677|GO:0005634
Sebi13g00270 289 MobiDBLite consensus disorder prediction 240 272 - -
Sebi13g00270 289 Pfam KNOX2 domain 154 203 IPR005541 GO:0003677|GO:0005634
Sebi13g00270 289 MobiDBLite consensus disorder prediction 63 93 - -
Sebi13g00270 289 MobiDBLite consensus disorder prediction 76 93 - -
Sebi13g00270 289 Pfam KNOX1 domain 99 140 IPR005540 GO:0003677|GO:0005634
Sebi13g00270 289 MobiDBLite consensus disorder prediction 203 226 - -
Sebi13g00270 289 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 79 180 - -
Sebi13g00270 289 MobiDBLite consensus disorder prediction 1 25 - -
Sebi13g00270 289 SMART KNOX2_2 148 204 IPR005541 GO:0003677|GO:0005634
Sebi13g00270 289 MobiDBLite consensus disorder prediction 253 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi13g00270 Sebi-Chr13 3204772 3207790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi13g00270 97 251 Homeobox Transcription Factor Family AT5G25220 76.730 4.15e-79 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi13g00270 - - gmx:100816347 423.32