Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi13g00267 ATGGGTAAACCAGATGGCAAAAGAGCTGCTCCTGGAAAGAAGGTCAGTGTTAAATATATTGGCAAGCTGAAAAAGGATGGGAAACTATTTGACTCAAATGTGGGAAGAATACCCTTTAAATTTCGCCTTGGACAAGTCATCAAGGGGTGGGAGGTTGGGGTCAATGGGATGAGGGTTGGGGACAAAAGAAGAATCACAATTCCACCATCTATGGGGTATGAAATTGCTCCATGTCTTCTTTTCTGTATTATACCTGAATGGCCTTTGGTGTGA 273 0.4286 MGKPDGKRAAPGKKVSVKYIGKLKKDGKLFDSNVGRIPFKFRLGQVIKGWEVGVNGMRVGDKRRITIPPSMGYEIAPCLLFCIIPEWPLV 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi13g00267 90 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 12 90 IPR001179 GO:0003755
Sebi13g00267 90 SUPERFAMILY FKBP-like 3 74 - -
Sebi13g00267 90 Gene3D - 2 81 IPR046357 GO:0003755
Sebi13g00267 90 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 1 74 - -
Sebi13g00267 90 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 7 74 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi13g00267 Sebi-Chr13 3162495 3163072 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi13g00267 12 73 Calmodulin-binding Proteins AT5G48570 49.231 1.09e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi13g00267 K14826 - gmx:100789099 142.124