Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi13g00246 ATGTTGACTCTGAAAGGAGGAAGCAGACCACCATGGGTGGGGCTAGGAGCTGCGGTGTGGGTTCAGATTGCTTCAGGGAACACCTTCACTTTCCCTCTATACTCTCACTCTTTGAAGTCCGTTTTAGGTTTCAACCAGCGACAGCTCACACTTCTCGGTGTCGCCAACGATATCGGCGAGAACGTTGGCTTGATTCCTGGTCTTGCTTGTAACAAGTTCCCTCCATGGCTCATCCTTTGCGTCGGTTCTCTCGCCTCTTTCCTTGGCTACGGTCTTCTCTGGCTCGCTGTTACCCAAACACTCCCCAACCTCCCTTACTTGTTGCTATGGTTTGCTCTCGTTATTGCTTCCAATAGTAGTGCATGGTTAACCACTGCTGTTCTTGTGACCAACATGAGAAATTTCCCTGTTAGTAGAGGCAAAGTTGCAGGAATCCTGAAAGGCTATGGGGGGCTTAGTGCTGCGGTTTTTACTGAAATTTACAGCATAGTGCTTCATAGCTCTTCTACTAAGTTCCTGTTGTTTCTTGCCATTGGTATTCCTGTTGTTTGCTTCAGTATGATGTTTCTTGTTAGGCCATGTACTCCGGCTTCTGATGAAGACTCTGCGGCGAATTGCCATTTTATATTTATCCAAGTTTCTAGTGTGGTCTTGGGCATATATCTTCTTGTAACTACAATATTTGGTAATGCTCTTCAATTAAGTGATACAGTTTCCTATATTTTGGTGGCTGTGATGATCCTTCTTCTCATGGCTCCAATTGCTGTCCCTATAAAGATGACACTGTTTCCTAAGAGAGCTTCCAATTCAGACTCACCTGACCAACGGCTTGGATCTTCTGACTCTCTTGTTCAAGGCAGAGATGAAAAAATAGAGCCCCTGCTAGCATCTTCATCAGCAGGAAACCTTGGAAGTTTTAATGATCAGGATGATTCATCGGAGGTAGCTATGCTTCTTGCTTTAGGTGAAGGAGCAGTAAAGCAGAAGAAGCGAAGGCCTAAACGTGGGGAAGATTTTAAGTTTACTGAGGCTATAATAAAGGCTGATTTCTGGCTACTCTTTTTAGTTTATTTTGTTGGTGTTGGCACTGGAGTTACTGTTCTCAATAATCTTGCCCAAATAGGTATTGCACAAGGTGAGGAAGATACCACAATCTTGCTGTCAATTTTCAGTTTTTGCAATTTTGTGGGCCGGCTTGGTGGAGGAGTTGTATCAGAACATTTTGTCAGGACAAAAACAATCCCAAGGACAGCTTGGATGACATGCACACAGATAATTATGCTCATTGTATACCTTCTATTTGCCTTTGCTGTCAAAGGAGCCCTTTATCCTGCAATTGCATTTCTTGGTGTCTGCTATGGTGTGCAAGTTTCCATAATGATACCCACTGTTTCTGAGCTTTTTGGTTTGAAGCACTTTGGTGTATTGAGCAACTTCATGGCAGTCGGAAATCCACTTGGTGCATTGCTTTTCTCAGCTCTGCTAGCTGGTTACATATATGATAATGAGGCAGCAAAGCAGCATGGTATTAACCTTTTTGCTTCGGGTGCTGCTTGCGTGGGTGCAAATTGCTTTAAGCTGACTTTCTTTATTCTTGCTGGTGTTTGTGGTGCTGGCATCATCTTGAGCATTATCCTGACTATGAGAATTAGGCCCGTTTACCAAATGCTTTATGCAGGAGGTTCTTTCAGGTTGCCTCAAACATCTTCAAGTCACTGA 1719 0.4375 MLTLKGGSRPPWVGLGAAVWVQIASGNTFTFPLYSHSLKSVLGFNQRQLTLLGVANDIGENVGLIPGLACNKFPPWLILCVGSLASFLGYGLLWLAVTQTLPNLPYLLLWFALVIASNSSAWLTTAVLVTNMRNFPVSRGKVAGILKGYGGLSAAVFTEIYSIVLHSSSTKFLLFLAIGIPVVCFSMMFLVRPCTPASDEDSAANCHFIFIQVSSVVLGIYLLVTTIFGNALQLSDTVSYILVAVMILLLMAPIAVPIKMTLFPKRASNSDSPDQRLGSSDSLVQGRDEKIEPLLASSSAGNLGSFNDQDDSSEVAMLLALGEGAVKQKKRRPKRGEDFKFTEAIIKADFWLLFLVYFVGVGTGVTVLNNLAQIGIAQGEEDTTILLSIFSFCNFVGRLGGGVVSEHFVRTKTIPRTAWMTCTQIIMLIVYLLFAFAVKGALYPAIAFLGVCYGVQVSIMIPTVSELFGLKHFGVLSNFMAVGNPLGALLFSALLAGYIYDNEAAKQHGINLFASGAACVGANCFKLTFFILAGVCGAGIILSIILTMRIRPVYQMLYAGGSFRLPQTSSSH 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi13g00246 572 Gene3D MFS general substrate transporter like domains 346 554 IPR036259 -
Sebi13g00246 572 CDD MFS_Mch1p_like 10 540 - -
Sebi13g00246 572 SUPERFAMILY MFS general substrate transporter 234 552 IPR036259 -
Sebi13g00246 572 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 555 - -
Sebi13g00246 572 SUPERFAMILY MFS general substrate transporter 15 196 IPR036259 -
Sebi13g00246 572 Pfam Nodulin-like 11 258 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi13g00246 Sebi-Chr13 2929151 2931612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi13g00246 2 572 Nodulin-like Gene Family AT1G80530 56.643 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi13g00246 - - gmx:100794012 915.605