Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi13g00228 ATGTCCCCAGCTGCAGGAGCCGTAGCTTTACACTCTTCCCTTTGCACCATCTCTTCCGATAAACCATCATCTCCTTCAAAATCAAGCACCAATTTGGCTGCCAAACCCAAAAGCCTCCTCCAAAACCATCCACTTTATACACCAACCCATGCAAAACTCTCCCTTCAATTCAAAGAGAAAATCTTGTGCCTTGAGGTAATGGGTGTTGATGCAGGTAAAGCACTGACCCAAAACCCTGACCTCCGCACAGCAACCATGGAATCTATTCATTCCATTATTTCCTTCCTTCTGACCAAAGGCATCCAGCATAAGGACTTGCCTAGGATCTTTGGCATGTGCCCCAAGATTCTCACCTCTGACATCAAAACTGATCTTAACCCAGTTTTTGATTTTCTCTTGCATGACCTCAAAGTCCCTGATCATAACTTTAGGAAGGTTATCAATAAGTGCCCAAGATTGCTTACATCTAGTGTGATTGACCAGCTTAAGCCAGCTTTGTTTTACCTAAAGAGACTTGGGTTCAAGGATTTGGCACCCTTGGCTTATCAAGATTCTGTTCTGTTGGTGTCTAATGTAGAGAGGACCCTTATCCCTAAGCTGAAGTATTTGGAGAATTTGGGATTTTCCAAGGATGAGGCTAGATGTATGGTGTTGAGATGTCCAGCATTGTTCACTTTCAGCATAGAAAATAATTTTCAGCCCAAGTTTGAGTATTTTTCTGTGGAAATGGGAGGAAAATTGAAGGAGCTGAAAGAATTTCCTCAGTACTTCGCTTTTAGTTTGGAGAACAGGATAAAGCCTAGACACATGGAGGTTGTGCAAAGTGGAATCAATTTGCCTTTGTCAGTGATGCTTAAAAGCACTGATGAAGAATTTAGGGAGCTGATAAAGAAAGGGGGTGGATGA 906 0.4249 MSPAAGAVALHSSLCTISSDKPSSPSKSSTNLAAKPKSLLQNHPLYTPTHAKLSLQFKEKILCLEVMGVDAGKALTQNPDLRTATMESIHSIISFLLTKGIQHKDLPRIFGMCPKILTSDIKTDLNPVFDFLLHDLKVPDHNFRKVINKCPRLLTSSVIDQLKPALFYLKRLGFKDLAPLAYQDSVLLVSNVERTLIPKLKYLENLGFSKDEARCMVLRCPALFTFSIENNFQPKFEYFSVEMGGKLKELKEFPQYFAFSLENRIKPRHMEVVQSGINLPLSVMLKSTDEEFRELIKKGGG 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi13g00228 301 PANTHER CGI-12 PROTEIN-RELATED 31 295 IPR003690 GO:0003690|GO:0006355
Sebi13g00228 301 Gene3D Transcription termination factor 3, mitochondrial 123 298 IPR038538 -
Sebi13g00228 301 Pfam mTERF 187 292 IPR003690 GO:0003690|GO:0006355
Sebi13g00228 301 Pfam mTERF 63 174 IPR003690 GO:0003690|GO:0006355
Sebi13g00228 301 SMART mt_12 107 139 IPR003690 GO:0003690|GO:0006355
Sebi13g00228 301 SMART mt_12 144 175 IPR003690 GO:0003690|GO:0006355
Sebi13g00228 301 SMART mt_12 72 102 IPR003690 GO:0003690|GO:0006355
Sebi13g00228 301 SMART mt_12 247 278 IPR003690 GO:0003690|GO:0006355
Sebi13g00228 301 SMART mt_12 178 209 IPR003690 GO:0003690|GO:0006355
Sebi13g00228 301 SMART mt_12 214 246 IPR003690 GO:0003690|GO:0006355
Sebi13g00228 301 FunFam Transcription termination factor MTEF1, chloroplastic 132 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi13g00228 Sebi-Chr13 2751379 2752284 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sebi13g00228 mTERF 7.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi13g00228 K15031 - gmx:100788221 493.812