Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi13g00164 ATGGTGCTTGTGAACCTTGGGAGGAAGAAAGAGGGACAGGGAATGCGACTTGGGAAATACGAATTGGGTAGGACTCTTGGTGAAGGCAATTTTGGAAAAGTCAAGTTGGCAAGGGACACAGATTCTGGACAACTTTTTGCTGTTAAGATCCTTGAAAAGACCAAAATCATTGACCTCAATAACGCTGATCAGATAAAGAGGGAAATATCCACCTTGAAGCTCCTGAAGCATTCCAACGTCGTTAGATTATACGAGTTCTATTCTAGAGAATGTGTGAGGCTACTGCTCAAGTACAGTAGACGTCTGAACCCGCAATTAAGGGTTGATCATTCAATCAACCCATTCTCCGATTATGGAGTTCTCAGTGTCTTGGCTAGCAAAACCAGAATTTATATGGTACTTGAGTACGTGAATGGTGGAGAGTTATTTGACAAAATTGCATCCAAAGGTAAACTTAGTGAAGCTGATGGCAGGAAGATGTTCCAACAGTTGATTGATGGTGTGAGCTACTGCCACAATAAGGGTGTCTTCCACAGGGATCTTAAGCTAGAGAATGTGCTTGTGGATGCCAAAGGGAACATAAAGATAACGGATTTTAACCTCAGTGCCTTGCCCCAACATTTTAGGGCAGATGGGTTGCTGCATACAACCTGTGGAAGTCCCAACTATGTTGCCCCTGAGATTCTTGCCAATAGAGGCTATGATGGTGCAACATCAGATATATGGTCATGCGGTGTTATCTTGTATGTTATCCTAACAGGATACCTTCCTTTTGATGATAGAAATCTTGCAGTTCTCTATCAAAAGATTTTCAAAGGAGATGTTCAGATACCAAGATGGTTGTCACCTGGTGCCCAAAACATTATAAAGAGGATTCTAGATCCCAATCCTAAAACCAGGATGACAATGAACATGATCAAAGAAGATGAATGGTTCAAGGAGGGCTATACTCCTGCAATTCCAGATGATGAAGAGGGTGTACACATTGATGATGAAGCCTTTTCCATCCAAGAAGTGCTACCAGAAGCTGAACAGGGTAGTCCAGGATCACCAACACTTATCAATGCATTTCAGTTGATAGGGATGTCTTCATGCTTAGATCTCTCTGGCTTTTTTGAAAAAGAGGATGTATCTGAGAGGAAGATAAGATTTACATCCAACCATTCACCAAAAGATTTGACAGAGAAGATTGAGGACATTGTAACAGAAATGGGATATAGAGTCCAGAAGAAAAATGGAAAGTTGAAAGTGATACAAGAAAACAGAGCACAGAAAAGTCTAGGTAGCCTCTCAGTGGCAGCAGAGGTGTTTGAGATAGGCCCATCTTTGTATGTAGTAGAACTAAGGAAGTCTTATGGAGATGCTTCTATATATAGACAGTTATGCAAGAAGTTATCAAATGACTTGGGTGTCCCGGGTTCACCCAAGGCACAGCTAGTGGCACAGCAGTGA 1452 0.418 MVLVNLGRKKEGQGMRLGKYELGRTLGEGNFGKVKLARDTDSGQLFAVKILEKTKIIDLNNADQIKREISTLKLLKHSNVVRLYEFYSRECVRLLLKYSRRLNPQLRVDHSINPFSDYGVLSVLASKTRIYMVLEYVNGGELFDKIASKGKLSEADGRKMFQQLIDGVSYCHNKGVFHRDLKLENVLVDAKGNIKITDFNLSALPQHFRADGLLHTTCGSPNYVAPEILANRGYDGATSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFKGDVQIPRWLSPGAQNIIKRILDPNPKTRMTMNMIKEDEWFKEGYTPAIPDDEEGVHIDDEAFSIQEVLPEAEQGSPGSPTLINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNHSPKDLTEKIEDIVTEMGYRVQKKNGKLKVIQENRAQKSLGSLSVAAEVFEIGPSLYVVELRKSYGDASIYRQLCKKLSNDLGVPGSPKAQLVAQQ 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi13g00164 483 FunFam Aurora kinase A 12 101 - -
Sebi13g00164 483 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Sebi13g00164 483 Gene3D Kinase associated domain 1, KA1 350 471 - -
Sebi13g00164 483 SMART serkin_6 20 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi13g00164 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Sebi13g00164 483 CDD CIPK_C 355 466 - -
Sebi13g00164 483 Gene3D Transferase(Phosphotransferase) domain 1 111 349 - -
Sebi13g00164 483 FunFam Non-specific serine/threonine protein kinase 351 472 - -
Sebi13g00164 483 Pfam NAF domain 351 410 IPR004041 GO:0007165
Sebi13g00164 483 FunFam Non-specific serine/threonine protein kinase 137 319 - -
Sebi13g00164 483 SUPERFAMILY Protein kinase-like (PK-like) 17 325 IPR011009 -
Sebi13g00164 483 Pfam Protein kinase domain 20 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi13g00164 483 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 456 - -
Sebi13g00164 483 Gene3D Phosphorylase Kinase; domain 1 5 98 - -
Sebi13g00164 483 ProSiteProfiles NAF domain profile. 349 373 IPR018451 GO:0007165
Sebi13g00164 483 ProSiteProfiles Protein kinase domain profile. 20 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi13g00164 Sebi-Chr13 1951743 1956892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi13g00164 120 481 CBL-interacting serine-threonine protein kinases AT3G17510 73.626 0.0 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sebi13g00164 Pkinase 1.5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi13g00164 K07198 - gmx:100815660 722.62