Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi13g00161 ATGGAAGAAAAAGTGTCAATTAAAAAATTGGTGGAAGTTGAGGAAAGGCCATGTGACACACCCAACGAATCCTCCATTCATAATACTGTGGGATCTACTGTACTGAGTTTGAGTCTGAATAATAACTCAGGACAACAAATTCAAGGACAGCCCCTAACCCAAATGCGAGTGAAGGTTGAGGAAGCGAAGAAGGAGAATGAGAAATTGAGAGGAGGCGCATCTTCAGAATATTATTGCAGCAAAAGAGAAGGATTAATTGCCTCAGAGGAAAACACTGATTATATAAAGAAGCTTGGAGGTGAAATCAACAGCCAAATAACATCGCAACAAGATCAAGCATCTTGCAGGAAAGCTAGAGTGTCCATAAGGGCTCGATCTGATTTTTCTATGATGGGTGATGGGTGTCAATGGAGAAAGTATGGACAGAAGACAGCAAAGGGCAACCCTTGTCCCAGGGCCTACTATCGTTGCAGCATGGGAACCGCATGTCCAGTTCGTAAGCAGGTGCAAAGGTGTTTTAAGGATGAGACTGTTCTCATAACAACCTATGAAGGGAACCATAATCATCCACTCCCACCAGCAGCTAGACCAATGGCAAACTCAACATCAGCTGCATTGAACATGTTCCTTTCTGGCTCAACCACAAGTTTACATGGCACCACTATATCAAACACACGCCTCTTCTCTTCATTATCTACCCCTGCTTCCACTGCTTTAGCTACTTTCTCCCCATCTGCAACATGTCCCACAGTGACACTGGACTTCACTCAACCCACTAATACCTATTTGCAATTCCAAAAGGCCACTTCACAATCCTTATTCCCTTTCCCATTGCAAGGTTACCCTCAAACATCTGAGGGGTTGTACTTGAGTTCTAAGGTTCCAACCATGACAACCCCAGGGGAAAACAACAACCTTGCCTTGGTGGATGTTGTGAGTGAAGCTATATCCAAAGACCCTTCTCTCAAGGCAGCACTTTATGCAGCCATTTCCTCAGTCACTGCTAAAGATCCTCAGAACATGACCAATAACCACAACCAACATGGTAAGAGTGGTTATGACCCTTGTTCTAAGATGCCTGCAATATTACCACCTCATCATTCCTACACCACTCAATTGATTTAG 1125 0.4391 MEEKVSIKKLVEVEERPCDTPNESSIHNTVGSTVLSLSLNNNSGQQIQGQPLTQMRVKVEEAKKENEKLRGGASSEYYCSKREGLIASEENTDYIKKLGGEINSQITSQQDQASCRKARVSIRARSDFSMMGDGCQWRKYGQKTAKGNPCPRAYYRCSMGTACPVRKQVQRCFKDETVLITTYEGNHNHPLPPAARPMANSTSAALNMFLSGSTTSLHGTTISNTRLFSSLSTPASTALATFSPSATCPTVTLDFTQPTNTYLQFQKATSQSLFPFPLQGYPQTSEGLYLSSKVPTMTTPGENNNLALVDVVSEAISKDPSLKAALYAAISSVTAKDPQNMTNNHNQHGKSGYDPCSKMPAILPPHHSYTTQLI 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi13g00161 374 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 98 346 IPR044810 GO:0003700
Sebi13g00161 374 Pfam WRKY DNA -binding domain 133 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi13g00161 374 SUPERFAMILY WRKY DNA-binding domain 124 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi13g00161 374 ProSiteProfiles WRKY domain profile. 126 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi13g00161 374 FunFam probable WRKY transcription factor 31 116 193 - -
Sebi13g00161 374 Gene3D WRKY domain 115 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi13g00161 374 SMART WRKY_cls 131 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi13g00161 374 Coils Coil 52 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi13g00161 Sebi-Chr13 1917472 1921461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi13g00161 112 333 WRKY Transcription Factor Family AT4G04450 48.945 5.06e-63 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi13g00161 WRKY 8e-23 CL0274