Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi13g00151 ATGGCTCTTTCTTCAACAAGAGAGTTTTCTCGAACACTAACACCCACTATCACACTCATCTTCTCCTTGGTGTTGCTTCTAGGCCTGTGCACGCCACGGGGTGCTGCTGCTCCCACTGACATTGTGGGATTAGAGTGCTTGAAGGTTGCTCCTTCTGAATTCGCTGGGTCAGTGAGAGCTGTCGTTGGCATTTTGCAAGATGTTATCTCTATTCTCTCAGAGTTCGGCAATGGCTTCGGCGATTTTCGTCTCTCTAATGCCATTTCTGATTGCCTCGATTTGCTTGATCTCTCCTCTGATGAACTTGACTGGTCTGTCTCCGCTACACAGACTCCCAAAGGGAAGCATAACAGTACTGGGAAGTTGAGTTCTGATTTGAGGACATGGTTAAGTGCTGCACTTGCGAATCCAGAGACATGCATGGATGGATTTGAAGGTACAAATGGCATGGTGAAGGGTCTAGTATCCACTGGCCTTGGTCAAATGATGTCGTTGCTGAAGCAGCTTCTAACCCAGGTGGACCCTGTTTCGGATCACTTCATGGGGCAGAGTAAGGGTGAATTTCCTTGGTGGGTTAAACCAGGGGAAAGGAAGCTGCTGCAGGAAAATGGGGTGCGTGTGGATGCTGTGGTGGCTGCTGATGGGAGTGGGAACTATACTAAGGTGATGGATGCGGTGTTGGCAGCACCTGATTATAGCATGGAACGCTATGTGATACATATTAAGAGGGGTGTTTACAATGAGAATGTGGAGATCAAGAAGAAGAAATGGAACCTCATGATGATTGGAGATGGCATGGATGCTACTGTTATCTCGGGTAACCGGAGTTTCATCGACGGTTGGACCACATTCCGGTCAGCTACCTTTGCTGTTAGTGGTAGAGGGTTCATAGCACGAGACATCACCTTCCAGAACACTGCAGGCCCCGAGAAGCACCAAGCAGTGGCTCTAAGATCTGACTCTGACCTCTCTGTATTTTACCGATGTGGGATCTTTGGTTACCAAGACAGCCTCTATACCCATACCATGCGCCAATTCTACAGAGAATGCAAAATCACTGGCACTGTGGATTTCATCTTTGGAGATGCTACTGCTCTGTTCCAAAACTGCCAAATTATGGCCAAGAAAGGGTTACCAAATCAAAAGAACACCATCACAGCTCATGGGAGAAAAGACCCTGATGAACCAACTGGTTTCTCCATCCAATTCTGCAACATCTCTGCTGATTCTGACCTTCTCACCTCAGTTAATTCCACTCAGACATACCTTGGAAGACCATGGAAACCATATTCTAGAACAATTTTCATGCAATCTTACATAAGTGATGTGTTAAGGCCAGAAGGGTGGTTAGAGTGGAATGGGGATTTTGCTTTGGACACATTGTATTATGCAGAGTACATGAATTATGGGCCAGGAGCAGGACTTAATAACCGAGTTAAATGGCCAGGGTATCATGTGATGAATGATTCTAGTCAAGCTAGTAACTTTACGGTGACCCAATTTATTGAGGGGAATCTGTGGTTACCTTCAACAGGTGTAACGTTCACTGCTGGATTGGGAGTTTAA 1566 0.463 MALSSTREFSRTLTPTITLIFSLVLLLGLCTPRGAAAPTDIVGLECLKVAPSEFAGSVRAVVGILQDVISILSEFGNGFGDFRLSNAISDCLDLLDLSSDELDWSVSATQTPKGKHNSTGKLSSDLRTWLSAALANPETCMDGFEGTNGMVKGLVSTGLGQMMSLLKQLLTQVDPVSDHFMGQSKGEFPWWVKPGERKLLQENGVRVDAVVAADGSGNYTKVMDAVLAAPDYSMERYVIHIKRGVYNENVEIKKKKWNLMMIGDGMDATVISGNRSFIDGWTTFRSATFAVSGRGFIARDITFQNTAGPEKHQAVALRSDSDLSVFYRCGIFGYQDSLYTHTMRQFYRECKITGTVDFIFGDATALFQNCQIMAKKGLPNQKNTITAHGRKDPDEPTGFSIQFCNISADSDLLTSVNSTQTYLGRPWKPYSRTIFMQSYISDVLRPEGWLEWNGDFALDTLYYAEYMNYGPGAGLNNRVKWPGYHVMNDSSQASNFTVTQFIEGNLWLPSTGVTFTAGLGV 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi13g00151 521 Pfam Plant invertase/pectin methylesterase inhibitor 86 167 IPR006501 GO:0004857
Sebi13g00151 521 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 163 IPR035513 -
Sebi13g00151 521 Gene3D Invertase/pectin methylesterase inhibitor family protein 51 174 IPR035513 -
Sebi13g00151 521 FunFam Pectinesterase 202 519 - -
Sebi13g00151 521 SMART PMEI_2 37 176 IPR006501 GO:0004857
Sebi13g00151 521 FunFam Pectinesterase 34 175 - -
Sebi13g00151 521 CDD PMEI-like_4 16 173 - -
Sebi13g00151 521 ProSitePatterns Pectinesterase signature 1. 233 252 IPR018040 -
Sebi13g00151 521 SUPERFAMILY Pectin lyase-like 206 518 IPR011050 -
Sebi13g00151 521 ProSitePatterns Pectinesterase signature 2. 352 361 IPR033131 -
Sebi13g00151 521 Gene3D - 203 519 IPR012334 -
Sebi13g00151 521 PANTHER PECTINESTERASE 85 509 - -
Sebi13g00151 521 Pfam Pectinesterase 208 505 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi13g00151 Sebi-Chr13 1769891 1773630 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi13g00151 18 519 Carbohydrate Esterase AT3G43270 65.116 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi13g00151 K01051 - gmx:100777500 870.537