Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi13g00120 ATGTCCTTGCCAGCAAGGGCACCTCCCAGAGCCAGAAACAACTCTGTTTTCACTTACACACAGAGTCAGCCTTCTTTTCCTCCTAATCTAGTCAGAACATCTGCTGATTCAAGGCCAAGTACTCCAATTATTCCTCCCAGTGTGAATGTCATCCCTAGCACTGGCACCAACTCGATTCATGAACACACTCAAGTGTCATCCAGACCTATTGTTTGTGATCTGCCAATTGCTAGGAAAGCTTCACTTCATCGGTTCCTTGAGAGAGAAAAGGATAGAATTGCTTCCAAAGCGCCATATCAACTGACAAATCCCATGGAGCCTGCAAATAAGCCAGCTGAAATCCATGCCATGGTTTGGGTTGGGTGTTAA 369 0.458 MSLPARAPPRARNNSVFTYTQSQPSFPPNLVRTSADSRPSTPIIPPSVNVIPSTGTNSIHEHTQVSSRPIVCDLPIARKASLHRFLEREKDRIASKAPYQLTNPMEPANKPAEIHAMVWVGC 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi13g00120 122 MobiDBLite consensus disorder prediction 13 49 - -
Sebi13g00120 122 Pfam Jas motif 75 100 IPR018467 -
Sebi13g00120 122 MobiDBLite consensus disorder prediction 1 49 - -
Sebi13g00120 122 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 24 107 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi13g00120 Sebi-Chr13 1370307 1371299 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi13g00120 29 121 Tify Gene Family AT1G19180 40.860 5.67e-16 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sebi13g00120 Jas_motif 1.8e-11 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi13g00120 K13464 - gmx:100801449 145.591