Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi13g00085 ATGGAAGACATCCTGGAACGATATGAGAGGAAAAACCATACAGAACTTGCTGGAGCTAACAATGAAACACAGGGAAACTGGTCTTTCGAGTACACCAAGCTCACTGCTAAAGTTCAAGTCTTGGAGAAGAACATAAGGAACTACGTGGGACAAGATCTGGATCCCTTAAGTACGAAAGAGCTTCAGAGTTTGGAGCAACAACTTGACACATCTCTTAAGCGCATCCGAACAAGAAAGGACCAAGTTATGAATCAATCCATCTCGGAGCTGCATAAAACGGCAAGGGCATTGCAGGAGCAAAACAGCAAGCTAGCAAAGATGAAGGAGAAAGAGAAGACATTAATTGAACGTCCATCCAGCTTCCCAGAAACCATAGGCCAATGTTCATCCACCTTTAACTTATTTTCTCCGGAGGTACTGCCACCACAAAGACTGGTTCCTTCACTAAATCTCAGTGGGACTTTACAAGGAAGAGCATCGGTGGAAGAAATGGCTGAAGGTCAAACCATCCCTAGTAGCAGTGCTCTGATTCCACCATGGATGCTGCATCATCTGACTAGTTAG 564 0.4468 MEDILERYERKNHTELAGANNETQGNWSFEYTKLTAKVQVLEKNIRNYVGQDLDPLSTKELQSLEQQLDTSLKRIRTRKDQVMNQSISELHKTARALQEQNSKLAKMKEKEKTLIERPSSFPETIGQCSSTFNLFSPEVLPPQRLVPSLNLSGTLQGRASVEEMAEGQTIPSSSALIPPWMLHHLTS 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi13g00085 187 Pfam K-box region 22 107 IPR002487 GO:0003700|GO:0005634|GO:0006355
Sebi13g00085 187 Coils Coil 87 117 - -
Sebi13g00085 187 Coils Coil 31 51 - -
Sebi13g00085 187 Coils Coil 61 81 - -
Sebi13g00085 187 ProSiteProfiles K-box domain profile. 24 114 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi13g00085 Sebi-Chr13 939653 941893 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi13g00085 1 187 MADS-box Gene Family AT5G60910 43.077 3.25e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi13g00085 K09264 - gmx:100788956 239.965