Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi13g00067 ATGCATAGTCGCGAGATATTTAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAACTATGACAAGGTCATGGAACTTTACAATGTTCAAAGGCTTAGCCGCCAAGCTTTCCCTCTTCCAACTCCACCAAGGTCTGAAGACGAGAGTTCAAAGCGTGAATCAGTAGAAGACAGCCCTGTGACACCTCCACTCAACAAGGAACGGCTACCTCGTAATTTATACCGCCCAACAGGGACAGGGATGGGAATGGGGTACTCATCCTCAGATTCTTTTGATCATCAGTCAATGCAATCTCGGCAGTACTATGATTCGAATGGCATGAACTCAACTCCAAAGGTGTCCACCATTAGTGCTGCCAAGACAGATATATCATCAATGGATGCTTCTATAAGAAGTAGCTCATCTAGAGAAGCTGATCGCTCTGGTGATCTATCAATCAGCAATGCCAGTGACCTTGATACTGAATGGGTTGAGCAGGATGAACCTGGGGTTTACATTACCATCAGAGCTCTCCCTGGTGGCAAAAGGGAGCTCAGACGAGTCAGGTTCAGGTACGCTTTCCACCAAGCTACTATTATATTCGAGAAAAATTTGGGGAGATGCATGCTAGAGTATGGTGGGAAGAGAATCGCGCCAGAATACATGAACAATACTTGCGATCAGATGCCAGAAGGGGCGCAACTTGCACCTCTACCTTTTTGGAGGGCCATATACATCCTTAGCACCCTCATCTCTCATCTTCATGCGGTCGGTTCTTTCTAG 762 0.4659 MHSREIFNKWQAQRWWAENYDKVMELYNVQRLSRQAFPLPTPPRSEDESSKRESVEDSPVTPPLNKERLPRNLYRPTGTGMGMGYSSSDSFDHQSMQSRQYYDSNGMNSTPKVSTISAAKTDISSMDASIRSSSSREADRSGDLSISNASDLDTEWVEQDEPGVYITIRALPGGKRELRRVRFRYAFHQATIIFEKNLGRCMLEYGGKRIAPEYMNNTCDQMPEGAQLAPLPFWRAIYILSTLISHLHAVGSF 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi13g00067 253 ProSiteProfiles BRX domain profile. 154 206 IPR013591 -
Sebi13g00067 253 PANTHER PROTEIN BREVIS RADIX-LIKE 1 3 205 IPR044532 -
Sebi13g00067 253 MobiDBLite consensus disorder prediction 36 92 - -
Sebi13g00067 253 Pfam Transcription factor regulating root and shoot growth via Pin3 3 27 IPR013591 -
Sebi13g00067 253 Pfam Transcription factor regulating root and shoot growth via Pin3 154 184 IPR013591 -
Sebi13g00067 253 MobiDBLite consensus disorder prediction 125 146 - -
Sebi13g00067 253 ProSiteProfiles BRX domain profile. 1 28 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi13g00067 Sebi-Chr13 789739 792088 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi13g00067 3 205 Major Intrinsic Protein MIP AT1G31880 41.748 9.60e-38 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi13g00067 - - gmx:100794109 313.153