Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi13g00066 ATGCTTACATGCATAGCACGTCCAAAGAAACTCGGGGACGACTCACTGAGTCACCCCGACGATTCCGACTCCAACAACAACAGCGCCGCAAAGAACCACCATGGCATCAAGTCACTAACATATCAGATAAAGGACATGGCGTTGAAGGCATCAGGTGCGTACAAGCACTGTAGCCCATGCGCGCCGCCGCCGAGTCGACTCGGGAGGACGCGGACGTGGGGAAAGGAGATGGAGGCGAGGCTCAAGGGGATCTCCAGCGGGGAGGGGACGCCGCCGACGCCGAGCTCCTCCTCTTCCTCCGCCGTCGGCAGCGGTCGGAGGTTGGTGGTGTTGGAGGAGGAGGACGAGCCTAAGGAGTGGGTGGCGCAGGTGGAGCCTGGCGTTTTGATTACCTTCGTGTCGCTTCCACGTGGCGGGAACGATCTCAAGCGGATACGGTTCAGGTACGTACCTACGTCTTTCTGTCTATCTTTCTGTGTCGTATTGTTGCTTTCGGTGCCGTTTTGA 507 0.5838 MLTCIARPKKLGDDSLSHPDDSDSNNNSAAKNHHGIKSLTYQIKDMALKASGAYKHCSPCAPPPSRLGRTRTWGKEMEARLKGISSGEGTPPTPSSSSSSAVGSGRRLVVLEEEDEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFRYVPTSFCLSFCVVLLLSVPF 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi13g00066 168 Pfam Transcription factor regulating root and shoot growth via Pin3 118 148 IPR013591 -
Sebi13g00066 168 MobiDBLite consensus disorder prediction 1 36 - -
Sebi13g00066 168 MobiDBLite consensus disorder prediction 21 35 - -
Sebi13g00066 168 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 148 IPR044532 -
Sebi13g00066 168 MobiDBLite consensus disorder prediction 58 105 - -
Sebi13g00066 168 MobiDBLite consensus disorder prediction 88 104 - -
Sebi13g00066 168 Pfam Transcription factor BRX N-terminal domain 27 60 IPR027988 -
Sebi13g00066 168 ProSiteProfiles BRX domain profile. 118 168 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi13g00066 Sebi-Chr13 786200 786706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi13g00066 1 147 Major Intrinsic Protein MIP AT1G31880 38.953 4.51e-24 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi13g00066 - - lang:109362855 155.992