Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi13g00061 ATGTACCCTGACTACTGGCTCAAAACCTTGGCCAGCTCTTTGGAGGGTTGCAACTTTAAGATTGCCTGGGGGTCTCAGTTGACGCAAAATCTGGCCCAAGCTTACTCTGCACCAGTGAACATCAATGTAGGTTCTCATGTTTGGGTTGAAGATAAAGTGCAAGCATGGATTGGTGGCGAAGTTTCTAAAATCAATAGTGAAGAAGTCCATGTTTGCACCACAAATGGGAAAACAGTTGTCATAAATATCTCAAAAGTTTTTCCCAAGGACGATGAAGCTCCCCCTGGAGGTGTAGATGACATGACAAAACTGTCATACTTGCATGAACCTGGAGTTCTGCACAACTTGGCAGCTAGATATGAACTCAATGAAATCTATACCTATACTGGCAATATCCTGATTGCGATAAACCCATTTCAAAGGTTACCACATCTATATGATACTCACATGATGGAACAATATAAAGGGGCTGCATTTGGAGAGTTGAGTCCCCATGTTTTTGCGGTTGCAGATGTTGCATACAGGGCAATGATCAATGAGGGGAAAAGCAACTCAATCCTGGTTAGTGGTGAGAGTGGGGCCGGTAAGACAGAGACAACAAAAATGCTTATGCGTTATCTTGCTTACCTTGGGGGCCGATCTGGAGTAGAAGGGCGAACTGTCGAACAACAAGTGCTAGAATCTAATCCAGTTCTTGAAGCATTTGGCAATGCAAAAACAGTTAGAAACAATAACTCAAGTCGTTTTGGTAAATTTGTTGAGATCCAATTTGACAACAAGGGGAGGATCTCTGGGGCAGCTATACGAACTTACTTGCTTGAAAGGTCCCGTGTTTGTCAAATTTCTGATCCTGAAAGAAATTACCATTGTTTTTATCTTCTTTGTGCAGCACCAGCTGAGGAAAAAAATAAGTATAAGCTGGGAGGTCCCAGTTCCTTCCATTACTTAAATCAATCCAACTGCTATGAACTGGATGGAGTTGATGATGCAAATGAATATATTGCAACCCGAAGGGCAATGGATGTTGTTGGAATCAATGAGGAAGAGCAGGAGGCAATTTTTAGGGTTGTTGCAGCAATTCTGCACCTTGGAAATATTGAATTTTCAAAAGGAGAGGAGATTGATTCTTCTGTCATCAAGGATGAGAAGTCTAGGTTCCATCTTAATATGACTGCTGAACTTCTTAAGTGTGATGCTAAGAGCTTGGAAGATGCACTGATCAAGCGTGTGATGGTAACACCTGAGGAGATTATTACAAGAACCCTTGATCCTGTTGCAGCTGTTGGTAGCAGGGATGCATTAGCTAAAACCATTTATTCACGTTTGTTTGATTGGCTTGTGGAGAAGATTAACATTTCAATTGGGCAAGATCCAAATTCAAAATTTATTATTGGAGTTCTTGATATCTATGGGTTTGAAAGTTTTAAATTGAACAGTTTTGAGCAGTTCTGTATTAATTTTACAAATGAGAAGTTGCAGCAACATTTTAATCAGCATGTCTTTAAAATGGAACAAGAAGAATACACCAAAGAAGAGATCAATTGGAGTTACATAGAGTTTGTTGACAACCAAGATGTTTTGGATCTAATTGAGAAGAAACCTGGAGGAATAATTGCACTCCTCGATGAAGCCTGTATGTTTCCTAAGTCCACACACGAAACATTTGCTCAGAAGTTGTACCAGACATTCAAAAATAACAAGCGCTTTATCAAGCCTAAACTTTCTCGTACTAGTTTTACCATATCCCATTATGCAGGGGAGGTGACATATCAGGCTGATATGTTTCTTGACAAAAACAAGGATTATGTGGTCGCAGAACATCAGCATCTGCTGATAGCCTCAAAATGCTCATTTGTGGCAGGTCTATTCCCCCCTTCTCCGGAGGAGTCTTCAAAATCATCCAAGTTCTCTTCGATTGGATCTCGTTTTAAGTTGCAACTTCAATCTTTGATGGAAACCTTAAATTCAACAGAACCTCACTATATCAGATGCGTGAAGCCGAACAATGTCCTCAAGCCCGCTATTTTTGAAAATCTCAATATCATCCAACAATTACGCTGTGGTGGTGTTCTTGAGGCAATAAGAATCAGCTGTGCTGGATATCCTACCAGACGGACCTTTTATGAGTTCCTTAACCGATTTGGTGTTCTGGCCCCCGAAGTTTTAGATGGAAACTATGATGACAAGGTTGCATGCCAAAATATCCTGGATAAAATGGGTATGAAGGGCTATCAGATAGGCAAGACAAAGACTTTCCTGAGGGCTGGTCAGATGGCTGAGTTGGATGCAAGAAGAGCAGAGGTTCTTGGAAAGGCAGCCAGAGTCATCCAGAGACAAATACGCACTCATATTGCACGCAAGGAATTCGTTGAATTGCGTCAAGCTGCAATTGTTTTGCAATCTGATTTACGAGGCATATTGGCTCGAAAGCTCTATGAGCAGTTGCAACGTGAAGCAGCAGCTGTGAAAATAGAAAAGAACTTCAAAGGATACATTGCCAGGAAATCTTACTTAACAGTGCGATTATCATCCATCACATTACAGACAGGTTTAAGGGCTATGAAGGCCCGCGATGAATTTAGATTTAGAAAGCAAACAAAGGCTGCAATTTTTATCCAGGCTCATTTACGGAGACACTTTGCATATTCTTATTATAAGCGATTGCAGAAGGCAGCAATTGTTTCTCAGTGTGGTTGGAGGAGAAGGGTTGCTAGGAGGGAACTTAGAATGCTCAAAATGGCTGCCAGAGAAACAGGGGCCCTTAAAGAAGCAAAAGACAAGCTAGAAAAGCGTGTTGAAGAACTTACATGGCGTTTGCAAATAGAAAAGCGTTTGAGAACTGATTTGGAAGAGGAAAAAGCACAAGAAATTGGTAAATTAAAGGATGCTTTGCATGCAATGCAAATAAAAGTAGAGGAAGCAAATGCCAAGGTCATCAAAGAGCGAGAGGCAGCTCAGAAAGCCATTGAAGAAACACCTCCAATCATTAAGGAGACTCCTGTTATAATTCAAGACACTGAAAAGATTAATTCCTTGATGGATGAAGTCAATAGTTTAAAGGAATCACTGCTATTGGAAAGAAAGAATAAAGAAGAGGCCAGAAAAGCTCAGACTGAGGCCGAGGCTAAAAATGAGGAGCTGGTTAAGAAAGTTGACGATTATGAGCATAAAGTGGATCAACTCCAAGAATTGGTTCAGAGGTTGGAGGACAAAATTTCCAATGCAGAATCAGAAAATCAAGTTCTTCGTCAGCAAGCCCTGGCTGTATCTCCAACTGGAAAAGCTCTATCTGCAAGACCTAAGACAGTGATTATTCAAAGGACACCAGAAAGTGGGAATGCTCTAAATGGTGGAGCAAAAACTGCATCAGATATGAGTCTTGCTGTATCAAATGTGCGTGAGCCTGAATCAGAGGGAAAACCACAAAAATCTCTCAATGAGAAGCAGCAAGGGAACCAGGACTTGCTTATCAAATGCATATCACAAGATTTGGGATATTCTGGGGGCAAACCTGTTGCTGCATGTGTTATATATAAATGCCTTCTTCACTGGAGATCATTTGAAGTCGAAAGAACAAGTGTTTTTGACAGTATCATTCAAACAATTACTTCAATCGTTGAGGCTCAGGATAATACTGATGTATTAGCCTATTGGTTGTCTAATACATCTACTTTGTTGTTGCTACTCCAACGCACTCTTAAAGCAAGTGGAGCAGCTAGTTTAACACCCCAACGGCGGAGAACAGCATCATCTTCTCTGTTTGGAAGAATGTCTCAAGGTCTAAGGCAATCTCCCCAAAGTGCTGCATCATTTGTAAATGGTCGAGGGCTTGGAAGATTGGATGATTTACGGCAAGTGGAAGCAAAATATCCGGCACTTCTGTTTAAGCAACAGCTCACTGCCTTCCTTGAAAAAATATATGGAATAATAAGAGACAATCTAAAAAAGGAGATATCTCCATTACTTGGATTGTGTATCCAGGCTCCAAGGACCTCACGGCAAAGTTTAGTAAAAGGACGTGCACGTGCTAATGCAGTTGCTCAGCAAGCTTTAATTGCTCACTGGAGAAGTATTGTGAACAGCTTAAACAATTATCTAAAGATATTGAAAGAAAATTATGTGCCCCCCTTCTTGGTCCGTAAAGTGTTCACTCAAATATTCTCTTTCATTAATGTTCAATTATTCAACAGTCTTCTGTTGCGACGCGAGTGTTGCTCCTTCAGTAATGGGGAGTATGTAAAGACAGGTTTGGGTGAGTTAGAACAGTGGTGCACTGAGGCAACAGAGGAGTATGCTGGCTCAGCTTGGGAGGAACTGAAACATATCAGGCAGGCTATCGGATTCCTAGTTCTTAGTATACAACAGTTATACAGAATCAGTACAATGTACTGGGATGACAAATATGGTACACACACTGTATCTACAGATGTTATAACAAACATGAGAAAGTTGATGTCTGAGGACTCAAACAACGCTGTCAGCAGTTCCTTCCTATTAGATGATGACTCTAGCATTCCATTTTCAGTGGATGACATTTCCAAATCAATGCCACAAGTAGACATAGCAGACGTGGATCCACCTCCATTGGTTCGTGATAATTCAGGATTTGGGTTCTTACTAGCACGCACAGAGTGA 4635 0.4097 MYPDYWLKTLASSLEGCNFKIAWGSQLTQNLAQAYSAPVNINVGSHVWVEDKVQAWIGGEVSKINSEEVHVCTTNGKTVVINISKVFPKDDEAPPGGVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDNKGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPAEEKNKYKLGGPSSFHYLNQSNCYELDGVDDANEYIATRRAMDVVGINEEEQEAIFRVVAAILHLGNIEFSKGEEIDSSVIKDEKSRFHLNMTAELLKCDAKSLEDALIKRVMVTPEEIITRTLDPVAAVGSRDALAKTIYSRLFDWLVEKINISIGQDPNSKFIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYQADMFLDKNKDYVVAEHQHLLIASKCSFVAGLFPPSPEESSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPAIFENLNIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLNRFGVLAPEVLDGNYDDKVACQNILDKMGMKGYQIGKTKTFLRAGQMAELDARRAEVLGKAARVIQRQIRTHIARKEFVELRQAAIVLQSDLRGILARKLYEQLQREAAAVKIEKNFKGYIARKSYLTVRLSSITLQTGLRAMKARDEFRFRKQTKAAIFIQAHLRRHFAYSYYKRLQKAAIVSQCGWRRRVARRELRMLKMAARETGALKEAKDKLEKRVEELTWRLQIEKRLRTDLEEEKAQEIGKLKDALHAMQIKVEEANAKVIKEREAAQKAIEETPPIIKETPVIIQDTEKINSLMDEVNSLKESLLLERKNKEEARKAQTEAEAKNEELVKKVDDYEHKVDQLQELVQRLEDKISNAESENQVLRQQALAVSPTGKALSARPKTVIIQRTPESGNALNGGAKTASDMSLAVSNVREPESEGKPQKSLNEKQQGNQDLLIKCISQDLGYSGGKPVAACVIYKCLLHWRSFEVERTSVFDSIIQTITSIVEAQDNTDVLAYWLSNTSTLLLLLQRTLKASGAASLTPQRRRTASSSLFGRMSQGLRQSPQSAASFVNGRGLGRLDDLRQVEAKYPALLFKQQLTAFLEKIYGIIRDNLKKEISPLLGLCIQAPRTSRQSLVKGRARANAVAQQALIAHWRSIVNSLNNYLKILKENYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKTGLGELEQWCTEATEEYAGSAWEELKHIRQAIGFLVLSIQQLYRISTMYWDDKYGTHTVSTDVITNMRKLMSEDSNNAVSSSFLLDDDSSIPFSVDDISKSMPQVDIADVDPPPLVRDNSGFGFLLARTE 1544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi13g00061 1544 ProSiteProfiles IQ motif profile. 771 795 IPR000048 GO:0005515
Sebi13g00061 1544 FunFam unconventional myosin-Va 867 915 - -
Sebi13g00061 1544 PANTHER MYOSIN 92 1475 - -
Sebi13g00061 1544 ProSiteProfiles IQ motif profile. 865 891 IPR000048 GO:0005515
Sebi13g00061 1544 CDD MYSc_Myo11 110 754 IPR036018 -
Sebi13g00061 1544 ProSiteProfiles IQ motif profile. 817 846 IPR000048 GO:0005515
Sebi13g00061 1544 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 819 917 IPR027417 -
Sebi13g00061 1544 FunFam unconventional myosin-Va 771 819 - -
Sebi13g00061 1544 Pfam DIL domain 1382 1457 IPR002710 -
Sebi13g00061 1544 SMART DIL_2 1381 1469 IPR002710 -
Sebi13g00061 1544 FunFam Myosin XI D 701 764 - -
Sebi13g00061 1544 ProSiteProfiles IQ motif profile. 792 821 IPR000048 GO:0005515
Sebi13g00061 1544 Gene3D - 819 866 - -
Sebi13g00061 1544 Gene3D - 768 818 - -
Sebi13g00061 1544 Gene3D - 867 916 - -
Sebi13g00061 1544 SMART MYSc_2a 90 767 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi13g00061 1544 Pfam Myosin N-terminal SH3-like domain 44 85 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sebi13g00061 1544 Coils Coil 1013 1085 - -
Sebi13g00061 1544 Gene3D - 286 344 - -
Sebi13g00061 1544 Pfam Myosin head (motor domain) 98 754 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi13g00061 1544 Coils Coil 957 991 - -
Sebi13g00061 1544 Gene3D - 701 767 - -
Sebi13g00061 1544 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 42 91 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sebi13g00061 1544 PRINTS Myosin heavy chain signature 516 544 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi13g00061 1544 PRINTS Myosin heavy chain signature 126 145 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi13g00061 1544 PRINTS Myosin heavy chain signature 230 257 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi13g00061 1544 PRINTS Myosin heavy chain signature 463 491 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi13g00061 1544 PRINTS Myosin heavy chain signature 183 208 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi13g00061 1544 Gene3D Kinesin motor domain 99 696 IPR036961 -
Sebi13g00061 1544 ProSiteProfiles IQ motif profile. 888 917 IPR000048 GO:0005515
Sebi13g00061 1544 FunFam Myosin 2 346 461 - -
Sebi13g00061 1544 CDD MyosinXI_CBD 1147 1510 IPR037975 GO:0007015
Sebi13g00061 1544 ProSiteProfiles Dilute domain profile. 1196 1532 IPR002710 -
Sebi13g00061 1544 ProSiteProfiles Myosin motor domain profile. 96 766 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi13g00061 1544 FunFam Class V myosin 473 614 - -
Sebi13g00061 1544 Pfam IQ calmodulin-binding motif 771 789 IPR000048 GO:0005515
Sebi13g00061 1544 Pfam IQ calmodulin-binding motif 793 812 IPR000048 GO:0005515
Sebi13g00061 1544 Pfam IQ calmodulin-binding motif 866 886 IPR000048 GO:0005515
Sebi13g00061 1544 Gene3D - 473 657 - -
Sebi13g00061 1544 SMART iq_5 839 861 IPR000048 GO:0005515
Sebi13g00061 1544 SMART iq_5 791 813 IPR000048 GO:0005515
Sebi13g00061 1544 SMART iq_5 887 909 IPR000048 GO:0005515
Sebi13g00061 1544 SMART iq_5 816 838 IPR000048 GO:0005515
Sebi13g00061 1544 SMART iq_5 768 790 IPR000048 GO:0005515
Sebi13g00061 1544 SMART iq_5 864 886 IPR000048 GO:0005515
Sebi13g00061 1544 FunFam Myosin heavy chain 286 341 - -
Sebi13g00061 1544 ProSiteProfiles IQ motif profile. 841 869 IPR000048 GO:0005515
Sebi13g00061 1544 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 819 IPR027417 -
Sebi13g00061 1544 Coils Coil 911 952 - -
Sebi13g00061 1544 Gene3D Myosin VI head, motor domain, U50 subdomain 346 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi13g00061 Sebi-Chr13 724244 739319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi13g00061 101 1544 Myosins gene family AT5G20490 80.396 0.0 2437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi13g00061 K10357 - gmx:100777802 2695.23