Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi13g00050 ATGGCCACGGGAGGCGCTCCTAAAGGACTATACCCTAATGACGGATGCTACCTGAATCGTGTGGATAATCCCAATCCTGTATGGAACAGTGAAAATTCCTTACTAATGAACTTTCCTGCCCTTATCGTCCAAATTTTCATTGTTGTCCTTGTAACTCGTTTGATATTCTGCATCCTCAAACTCATCAATCAACCTCATTTCGTTGCTGAGCTTCTTAATGCGCTACCTGTGAAGGGAATCCTAAGTTTTGAAACCATTGCACAATTGGGTCTCATCTATTATGTATTCATCACTGGCTTGGAGATGAACTTAGACATTGTCCTACGTGCACGAAAGAAGGCAACGAGCATTGCCATTGCTGGCACCTTCATTCCTATGGTTTTGGGGGTTGGAATATATTATGTGGTTCTACATGTCTATGGTGAAGTGTCACATTACAACACATCTAATGCTTATATATGTTGGGCTTTAGCTGTTGGTGTCACAAGTTTTCCCGTCCTTGCACACATCCTTGGGGACCTCAAGATCCTCTACACTGGGCTTGGTAGAGTGGCCTTAACAGCAGCCACTATTAATGACTTTTACAATTGGTCTCTGTTTGTGCTCTTGCTTCCATTTGCCGTTAATGGTCGAAATGGCATTTACTCAGTCATAGGCACCGTGATTTTCAGCCTTATCTGCTTCTTTGTGTTACGCCCTCCCCTAAGGCGGCTATTAACACATAAAACTGATAAAAATGAGTGGGATAATTATCAATTGTCATATGTGATCATGGGTATCTTTGCTTGTGCAACTGTTACTGAAATGCTTGGTACACACTCTGTTGTTGGGGCTTTGGTGTTTGGATTGATCCTTCCTCGTGGAAGGTTTACAGAAATGTTGATAGAGCAATCAGATGATATTGGATCTGGGTATCTGGCACCCTTGTTCTTTGCTAGCATTGGTGTCAGAACCAACACAAGTGATGTTATATCACATAAAGGTTTCACAATGTTTGCAGCAATCATGCTCTTGTTAGGCTCCACCAAGATTGTAAGCACTATAATAGCCACTCGCTTCTATGAAATGCCTGTAAGAGATAGTGTGGCTCTTGGAGTGCTTATGAACACCAAAGGCATCTTACCATTAATAGTGCTAAACGTTGCATGGAATAGGAAGATTTTGAGTCAGGAGTCCTTTACCATTATGGTGTACAGTATCTTTGTTATGACTGCAGTAGTGCCTCCTATCATCAACGCCATGTATAAGCCAAGAAGGACATATGAGCAAAATAAATTAAGGACTATTGAAAACTTGAAAGTTGATTCAGAAATCAGAGTTATGGTTTGTGTACACAACGCACGCCAAGCCAGTGGAATGATGAAAATCCTTGAAGCCTGCAGTGGCACTAATGTTTCCCCTTTACGTGTTTTTGCTCTTCAGCTTATTGAGCTCAAAGGACGTTCAACTGCCCTTCTAGTTGCTCGCATGGAGCAACCCAATTCCCACCAGAGTGGACCTGAAGCACTTACCAGATCAGAATCACACATGCAAGGCATTGCCTGCAATTTTGAAGAATTTGCATCTAACCATGAACAAATTTTTGTGGAGAATCTTGTTGCTATGTCATCCTATACAACTATTCATAAGGACATATACCATTTAGCATCAGAGAAACAAGCATCATTGGTTCTCCTTCCTTTTCAGAAACAGTCTAACTCAGAAGGTACTCTAGAGGAAACCAATACCTCATTCAAAGACATTAACCGGAATGTCATGCAAGATGCACCTTGTTCTGTGGGAATCTTTGTTGATCGTGGTCCTGAGACATTGTCCAAGACCAATTTGCACATTCTTGTTCTCTTCATTGGTGGGCCTGATGACCGTGAAGCCTTATCAATTGCTTGGAGAATGTCAAGGCATCATGGGACTCAGCTCTCAATGGTGAGGATTATTTTGTGTGGAAAGGCTGCAGAAGTAAATAAATCAACCTATAATGAAGCTCATGGGCTATTATCTGCGGTACTAGACAGTGGAAGGCAAAAAGAGTTGGATGAAGAATATGTAGGTTCATTTAGACTCAAGGCAGTGAACAATGAGGATTCCATAACTTATTCAGAGATGGAAGTGCACACTGGTGATGCTATAAATGAAGTCCTTAATGAACTAGACAAGGGAGGTTATGATTTGTACATTTTAGGACAAGGAAAAGGAAGGAACTCTTCATTATTGGAAAATTTATTGGAATGGAGTGACTGCCCTGAACTGGGAGTTATTGGGGACATTTTGGCATCCAATAGTTTTGGTTCAAGCTCTTCAATACTTGTTGTGCAACAATATGGTTTTGGGGGAATGGAATTTAAGGCTAATAATAACAACACTCAACCTTCCAACCAAGGGCGTTCAAGTGATGATGACATTGAGACCCTTTTTCCAAAGAAAGAGTGA 2427 0.4124 MATGGAPKGLYPNDGCYLNRVDNPNPVWNSENSLLMNFPALIVQIFIVVLVTRLIFCILKLINQPHFVAELLNALPVKGILSFETIAQLGLIYYVFITGLEMNLDIVLRARKKATSIAIAGTFIPMVLGVGIYYVVLHVYGEVSHYNTSNAYICWALAVGVTSFPVLAHILGDLKILYTGLGRVALTAATINDFYNWSLFVLLLPFAVNGRNGIYSVIGTVIFSLICFFVLRPPLRRLLTHKTDKNEWDNYQLSYVIMGIFACATVTEMLGTHSVVGALVFGLILPRGRFTEMLIEQSDDIGSGYLAPLFFASIGVRTNTSDVISHKGFTMFAAIMLLLGSTKIVSTIIATRFYEMPVRDSVALGVLMNTKGILPLIVLNVAWNRKILSQESFTIMVYSIFVMTAVVPPIINAMYKPRRTYEQNKLRTIENLKVDSEIRVMVCVHNARQASGMMKILEACSGTNVSPLRVFALQLIELKGRSTALLVARMEQPNSHQSGPEALTRSESHMQGIACNFEEFASNHEQIFVENLVAMSSYTTIHKDIYHLASEKQASLVLLPFQKQSNSEGTLEETNTSFKDINRNVMQDAPCSVGIFVDRGPETLSKTNLHILVLFIGGPDDREALSIAWRMSRHHGTQLSMVRIILCGKAAEVNKSTYNEAHGLLSAVLDSGRQKELDEEYVGSFRLKAVNNEDSITYSEMEVHTGDAINEVLNELDKGGYDLYILGQGKGRNSSLLENLLEWSDCPELGVIGDILASNSFGSSSSILVVQQYGFGGMEFKANNNNTQPSNQGRSSDDDIETLFPKKE 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi13g00050 808 Pfam Sodium/hydrogen exchanger family 49 413 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Sebi13g00050 808 MobiDBLite consensus disorder prediction 783 798 - -
Sebi13g00050 808 Gene3D - 468 751 - -
Sebi13g00050 808 Gene3D - 39 424 IPR038770 -
Sebi13g00050 808 PANTHER CATION/H + ANTIPORTER 31 773 - -
Sebi13g00050 808 MobiDBLite consensus disorder prediction 783 808 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi13g00050 Sebi-Chr13 596738 599810 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi13g00050 16 773 Antiporter Super Family AT2G13620 35.459 6.23e-174 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi13g00050 - - mtr:11442852 1002.66