Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi13g00047 ATGAATAGATCATGCAGTTCTAATGCATATCTCTGGCTTATGAATTTCTTCGTTTTGAGTGTGACTGTAAGGTCCCAACTGACTCCAGATTTTTATATGACAACATGCCCTGATCTTTTTAGAATAGTAAGGAGAGAGGTTCAAAACGCTTTAAAAATTGAGATGCGAATTGGTGCTTCTCTGCTTCGGCTTCACTTCCATGATTGCTTTGTAAATGGTTGCGATGGTTCAGTTCTGCTTGATGGAGACGATGATAGTGAGAAACTTGCTGCACCTAACTTGAATTCTGCTAGAGGATTTGAAGTTATAGATACAATCAAAAGTTCAGTGGAGAGTGCATGTAGTGGAGTCGTGTCCTGTGCTGATATATTAGCCATAGCTGCCAGAGATTCTGTTCTCCTCCTAGGACGGAGAGATGGATTAGTCTCAAACGGGACACTGGCAAATCTTGCACTTCCTTCTCCATTTGACACACTAGACACTATCATTTCCAAGTTTAATAACGTTGGTCTCAATCTCAAAGACGTTGTTACTTTATCAGGTTCCCATACTATTGGACGAGCAAGGTGCACATTTTTTAGCAATAGATTATTCAACTTCTCAGGGACAGGAGCACCAGACAGTACTATAGAAACCAACATGCTCACTGAATTGCAAAATTTGTGTCCACAAAATGGAGATGGGAACAAGACTAGTGTGCTAGACCCGAATTCAGTGGATCTGTTTGATAACCACTACTTCAAGAATTTACTCAATGGAAAGGGTCTCCTTGGCTCTGATCAGATTCTCTTTTCGAGTGATGAGGCCACTGCAACCACTAAACCTCTGGTCCAATTTTATAGCGAAAACGAAAGAAATTTCCTTGTGGAATTTCCCTATGCCATGATCAAGATGGGCAATATAAATCCACTGACTGGTTCTGACGGAGAGATTCGGAAGAACTGCAGAGTAGTTAATTCTTAA 963 0.4081 MNRSCSSNAYLWLMNFFVLSVTVRSQLTPDFYMTTCPDLFRIVRREVQNALKIEMRIGASLLRLHFHDCFVNGCDGSVLLDGDDDSEKLAAPNLNSARGFEVIDTIKSSVESACSGVVSCADILAIAARDSVLLLGRRDGLVSNGTLANLALPSPFDTLDTIISKFNNVGLNLKDVVTLSGSHTIGRARCTFFSNRLFNFSGTGAPDSTIETNMLTELQNLCPQNGDGNKTSVLDPNSVDLFDNHYFKNLLNGKGLLGSDQILFSSDEATATTKPLVQFYSENERNFLVEFPYAMIKMGNINPLTGSDGEIRKNCRVVNS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi13g00047 320 Gene3D - 31 319 - -
Sebi13g00047 320 Gene3D Peroxidase, domain 2 153 298 - -
Sebi13g00047 320 ProSiteProfiles Plant heme peroxidase family profile. 26 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi13g00047 320 SUPERFAMILY Heme-dependent peroxidases 26 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi13g00047 320 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi13g00047 320 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi13g00047 320 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi13g00047 320 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi13g00047 320 Pfam Peroxidase 43 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi13g00047 320 PANTHER PEROXIDASE 72-RELATED 19 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi13g00047 320 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi13g00047 320 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi13g00047 320 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi13g00047 320 PRINTS Plant peroxidase signature 174 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi13g00047 320 PRINTS Plant peroxidase signature 249 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi13g00047 320 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi13g00047 320 PRINTS Plant peroxidase signature 233 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi13g00047 320 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Sebi13g00047 320 FunFam Peroxidase 153 298 - -
Sebi13g00047 320 CDD secretory_peroxidase 26 318 IPR033905 GO:0004601|GO:0042744
Sebi13g00047 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 175 185 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi13g00047 Sebi-Chr13 569724 571497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi13g00047 11 319 Peroxidase AT5G19890 60.692 8.67e-133 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi13g00047 K00430 - gmx:100817622 458.759