Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi13g00032 ATGAAGACGGGGGTGGTTTTGGCACTGATTCTGCAGCTGGTGAAGTTCTGTATCATTGGTTTTGCTGTGGAAGCGCAAGGACCTGAAGCATTCCTTCTAGTTGTTCATCCTAGAGGAGAAGCACCTGGTCCTATCCATCATGGACAGTCATGGGGAAGCAGTGCATCAAGCCCTTCAGAGCCAAATGGGTTTGCTATATCCCCATCTCCAGCAACCTTTCCTGTGGATCCTTCTCCCAGTGAAGCACCTGGTCTTTTACAACCAAATGGGTCATTCTTGCACCCTCCAGTTACATTACCACCTCCTACATCAGCTCCAACTCCTCAGAAGATTAAAGGAATTGAACCATCTATATCTCCTAGTCCAAGCATTAAAACATTATCACCACCATATAATGCTGTTCCAACACCATCAACTACTGAAAGGAATGTGCCACCATCCATACAACCAAGTCCACCTCAAAAGAAAGCACCTTCTGTTAGGCCTCCTGTACCCACCCCAACTGCTCCAGCTCCTGTTGCAGTACCTTCTGGCAATTTTCCAAGAATTTCCCCTGTCAGCCACCCAATTGAACATGGAAGTTTGCCTCCGATGATTGATAAGAGGAATGAAACTAAGAATCACAACCTACAGCCAGTTTCACCAGCCCCAATTGCAACACCTTCTACCAATTTCCCCAAGATATCACCTGTAAGCCATCCAACTGAAAATGGAAGTTTGCCTCCTAATGCTCATAGAGAGGGTACAAATAAAGGTCAAACCCCAGAGCCAATTTCACCAGCTCCTGTATTCAATTTGCCCAAACATTTTCCGGTGAGTCAGCCAACTGAACATGGAAGTTTGCCTCCAACTGTTCATAGAAGGAATTCCAGCACGGGTCACACATTGGATCCAGTTTCACAAGCCCCGGTTGCAATACCGCCTGCAATTTTGCCAAAAAGTTCACCAGTCAGCCAACCAATTCAAAATGCAAGTTTTTCACCTAATGTTCACAATGGAACAGCAAATAAACATCATACTCACACCCCAGAGCCAGTAATGGCATCACCGGTTACATCACCTACAAGTCCATTTCCAGTAGATCCTCCATTGGTCCATCCAGTCATACCAGCTGCATCTCCATCCAAGTCACCAGCACCTATTATCTCTCCTGCATTAACTCCTTCCAGAAGATTCAACTGGACAAAAGGTGGACAACCAGCTTCTGCTCCTTCGTACAGAACACCAAAGCCACAATCAAAGCCACTACCGGCTATAGTACATTCCCCTGCTCAAGCTCCTGCTGTTCATAAAGAAAATCATCCTCCTGCATCTTCACCTTCAACCACAGTTTATAAGCATCACCATACAAGGAACACAATCACCAGTCCAGCTCCTGCATCATCATATTTAGTTTCTCCCCCCTCTTCAACACACCAAGATAAACCAATTCCTCCATCGTTACTGCCAACAAGTGGACGAAGACATCATGCACCACCACCAATAAACACAGGTTCTTCAGTTTCTCCATTCGCCTTCCCTATTCAATCACCAGTGAGCCAGGTTTCACCCGCTCCTTCTCCATCATTCAAAATATCCCCCCACCCAACCAAAATTCCATTTCATCCTCCTAAAGTATCTCCTTATCGGCCTACTTCCAAGAGCCCTAAGAAGCCAACCTTTCCAGAAGTTCAAGCATTGCCACCCCCACCTCCCAATGAAGATTGTTTATCAACTGTTTGCTCAGAGCCCTATACAAATTCTCCACCTGGATCACCTTGCAGATGTGTCTGGCCCATGAAAGTTGGCCTTCGCCTTAGTGTTTCTCTGTATACCTTCTTCCCTTTGGTTTCAGAGCTTGCTTCTGAAATTGCCACTGGGGTTTTCATGAGACAAAGTCAAGTTCGCATTATGGGAGCCAATGCAGCAAGCCAGCAACCAGATAAAACTATTGCCCTCATTGATTTGGTACCACTTGGGGAAGAATTTGACAAAACTACAGCCTTTTCAACTTCTGAGAGATTTTGGCACAAACAGGTTGTTATAAAAGCTTCTTACTTTGGTGATTATGACGTGTTATATGTGAACTATCCAGGTTTACCTCCATCTCCTCCTTTACCACCTTCAAGCATTAACATGGTAGATGGTGGCCCATATTCAGTTGGTGGCAATAATGGTAGGACAATAAAGCCCCTTGGGGTTGACATACAGAAGAGACAGCACAAGGGTGGACTTAGCAAGGGTGTAATAGCTATCATTGCTCTTTCAGTTTTTCTAGCAATTGTTTTATGCTCTGCTGCTGCTTTGACCGTGTTCAAGTGCAGAGATCATGTGAGTCAACAAACATCAACCCCACGGGTTTTGCCTTCTCTTTCCAAAGCACATGGTACTGCTGGGTCATTAGTTGGAGGTGTGCTTGCTTCAGCTTCATCATCATTTCGCTCTAGCATTGCTGCTTATACAGGATCTGCTAAGACTTTCAGTATGAATGAGATAGAGAAAGCCACTGATAATTTTCATCCTTCCAGAATACTTGGAGAAGGTGGTTTTGGGCTTGTTTATAGTGGTAGCCTTGAAGATGGGACAAAAGTAGCTGTGAAGGTTCTAAAAAGGGAGGATCATCATGGTGATCGTGAATTCCTATCTGAAGTTGAGATGCTTAGCCGCCTTCACCATAGAAATTTGGTAAAGTTGATTGGAACCGATGTACCTTTTGATAGTGTGGCTAAAGTTGCAGCCATTGCTTCAATGTGTGTACAACCAGAGGTATCAGACCGTCCTTTCATGGGCGAGGTTGTTCAGGCTTTAAAACTTGTGTGTAATGAATGTGATGAAGCAAAAGAAGCAGGTTCAAGAAGTTCTAGCCAGGAGGATTTATCTGTTGATTTGAATAATGTTTCTGGACAACTAACAGATAATTTCCAAGGCCAATTCTCAGCCACACACTATGATTCTGGAGTTGATATTGAAAATGGTTTGTCAGCATCAGAGTTATTCAGCTCATCAGCAAGACTTGGAAGGCAAGTATCTGGATCATTTAGAATACATTCTTATTCAGGTCCTCTAAGAACTGGAAGAAGCAGGAGGTTGTGGCAGATAATTCGAAAGCTTTCCGGTGGCAGTGTCAGTGAACATGGAACTATGTTCAAGTTATGA 3135 0.4427 MKTGVVLALILQLVKFCIIGFAVEAQGPEAFLLVVHPRGEAPGPIHHGQSWGSSASSPSEPNGFAISPSPATFPVDPSPSEAPGLLQPNGSFLHPPVTLPPPTSAPTPQKIKGIEPSISPSPSIKTLSPPYNAVPTPSTTERNVPPSIQPSPPQKKAPSVRPPVPTPTAPAPVAVPSGNFPRISPVSHPIEHGSLPPMIDKRNETKNHNLQPVSPAPIATPSTNFPKISPVSHPTENGSLPPNAHREGTNKGQTPEPISPAPVFNLPKHFPVSQPTEHGSLPPTVHRRNSSTGHTLDPVSQAPVAIPPAILPKSSPVSQPIQNASFSPNVHNGTANKHHTHTPEPVMASPVTSPTSPFPVDPPLVHPVIPAASPSKSPAPIISPALTPSRRFNWTKGGQPASAPSYRTPKPQSKPLPAIVHSPAQAPAVHKENHPPASSPSTTVYKHHHTRNTITSPAPASSYLVSPPSSTHQDKPIPPSLLPTSGRRHHAPPPINTGSSVSPFAFPIQSPVSQVSPAPSPSFKISPHPTKIPFHPPKVSPYRPTSKSPKKPTFPEVQALPPPPPNEDCLSTVCSEPYTNSPPGSPCRCVWPMKVGLRLSVSLYTFFPLVSELASEIATGVFMRQSQVRIMGANAASQQPDKTIALIDLVPLGEEFDKTTAFSTSERFWHKQVVIKASYFGDYDVLYVNYPGLPPSPPLPPSSINMVDGGPYSVGGNNGRTIKPLGVDIQKRQHKGGLSKGVIAIIALSVFLAIVLCSAAALTVFKCRDHVSQQTSTPRVLPSLSKAHGTAGSLVGGVLASASSSFRSSIAAYTGSAKTFSMNEIEKATDNFHPSRILGEGGFGLVYSGSLEDGTKVAVKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGTDVPFDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAKEAGSRSSSQEDLSVDLNNVSGQLTDNFQGQFSATHYDSGVDIENGLSASELFSSSARLGRQVSGSFRIHSYSGPLRTGRSRRLWQIIRKLSGGSVSEHGTMFKL 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi13g00032 1044 MobiDBLite consensus disorder prediction 114 145 - -
Sebi13g00032 1044 Gene3D Phosphorylase Kinase; domain 1 804 897 - -
Sebi13g00032 1044 MobiDBLite consensus disorder prediction 277 298 - -
Sebi13g00032 1044 MobiDBLite consensus disorder prediction 44 170 - -
Sebi13g00032 1044 MobiDBLite consensus disorder prediction 388 409 - -
Sebi13g00032 1044 MobiDBLite consensus disorder prediction 495 521 - -
Sebi13g00032 1044 FunFam receptor-like protein kinase FERONIA 798 896 - -
Sebi13g00032 1044 MobiDBLite consensus disorder prediction 435 478 - -
Sebi13g00032 1044 MobiDBLite consensus disorder prediction 522 543 - -
Sebi13g00032 1044 MobiDBLite consensus disorder prediction 350 369 - -
Sebi13g00032 1044 Pfam Protein tyrosine and serine/threonine kinase 835 894 IPR001245 GO:0004672|GO:0006468
Sebi13g00032 1044 MobiDBLite consensus disorder prediction 49 66 - -
Sebi13g00032 1044 PANTHER OS01G0750732 PROTEIN 895 956 - -
Sebi13g00032 1044 MobiDBLite consensus disorder prediction 315 336 - -
Sebi13g00032 1044 MobiDBLite consensus disorder prediction 211 563 - -
Sebi13g00032 1044 MobiDBLite consensus disorder prediction 146 170 - -
Sebi13g00032 1044 MobiDBLite consensus disorder prediction 211 256 - -
Sebi13g00032 1044 SUPERFAMILY Protein kinase-like (PK-like) 807 894 IPR011009 -
Sebi13g00032 1044 ProSitePatterns Protein kinases ATP-binding region signature. 838 860 IPR017441 GO:0005524
Sebi13g00032 1044 ProSiteProfiles Protein kinase domain profile. 832 1044 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi13g00032 Sebi-Chr13 363327 371739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi13g00032 156 893 Receptor kinase-like Gene Family AT5G56890 42.731 9.61e-134 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Sebi13g00032 PK_Tyr_Ser-Thr 5.8e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi13g00032 - - gmx:100802309 1173.3