Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi13g00026 ATGGCTACTGCATTGACTGTGCCTAAACATGAACCAAAAACGTCCTCGCTTTCCTCCCCAAGGTTACCTCGCAGAGTACTCCTCCAAGGGGAAGCTCCTTTACCCTATAATGATGAGTCCTCTTTCGGGAACAAACCTCAACCATGGTCCTTCATCCTTGGAGGGATAGTAGTTGTGGCCATATTGTTGATTCTTTTCTTTATATATCGGAAGCGTATCAAACGCCCACCACACTCAAAAGGAAAAACACCTCCAACTATAGAGCACCAAGAGGTGATAAAGATGGTATTTCCACCCAAACAACAACAACAACCTCCAGGGTCTATGGAATTCTTTAGTGGGAACCTTCCAACAATTAGCTACTTTGACTACCAAACATTGAGGAATGCAACCAAGAATTTTTGTCCTGAAAATCTTCTTGGAAGTGGTGGATTCGGGCCTGTCTACCAGGGAAAGTTGGTAGATGGAAGGATGATTGCAGTGAAGAAATTGTGTCACAACAAATCCCAACAGGGAGAAAGAGAATTTCTGGTAGAGGTGAAAACGATCACTAGTATCCAACACAAAAATCTGGCATGGAAACTGTATGACAAGTCAAGTATATTGGATATTGTGGATCCAAAGCTGCGAGAACATGGATTTGTAGAAAAGGATGTTATGCAAGCAATCCATGTGGCTTTCTTATGTCTTCAGCCTCATGCACATTTGAGACCCCCCATGTCAGCGATTGTGGCGTTATTGACATTCAAAATTGAAATGGTTACAACACCAATGAGGCCAGCCTTCTTCGATCGGAGGCGCAGAAAGGGTGAAGAGAACCATTCTTTTGAAGCAACATCAGGCTAA 846 0.4326 MATALTVPKHEPKTSSLSSPRLPRRVLLQGEAPLPYNDESSFGNKPQPWSFILGGIVVVAILLILFFIYRKRIKRPPHSKGKTPPTIEHQEVIKMVFPPKQQQQPPGSMEFFSGNLPTISYFDYQTLRNATKNFCPENLLGSGGFGPVYQGKLVDGRMIAVKKLCHNKSQQGEREFLVEVKTITSIQHKNLAWKLYDKSSILDIVDPKLREHGFVEKDVMQAIHVAFLCLQPHAHLRPPMSAIVALLTFKIEMVTTPMRPAFFDRRRRKGEENHSFEATSG 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi13g00026 281 SUPERFAMILY Protein kinase-like (PK-like) 108 192 IPR011009 -
Sebi13g00026 281 MobiDBLite consensus disorder prediction 1 22 - -
Sebi13g00026 281 Gene3D Phosphorylase Kinase; domain 1 108 197 - -
Sebi13g00026 281 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 192 272 - -
Sebi13g00026 281 Pfam Protein tyrosine and serine/threonine kinase 138 191 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi13g00026 Sebi-Chr13 280761 283156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi13g00026 192 253 Receptor kinase-like Gene Family AT1G53430 40.323 4.97e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi13g00026 PK_Tyr_Ser-Thr 3.8e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi13g00026 - - lja:Lj6g3v1270820.1 223.402