Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi13g00007 ATGAGTTTCCTGAATGGTTCTTCACCTCGCCGGCCAGCGGCAGAGAATGATATAGAAGCTGGTCCAGCGAGTCGACGCTCTTCCGACGTCGACGACAGTGATTTCTCCTCTCCGTTTGATATTGCCAGAACCAAGAACGCTTCGATTGAACGACTAAGGCGGTGGAGGCAAGCGGCACTTGTGCTAAATGCTTCTCGTCGATTTCGTTATACCTTGGACTTGAAAAAAGAAGAAGAGAAGAAACAAATATTGAGAAAGATTAGAGCGCATGCACAGGCCATTAGAGCAGCATATCTTTTCAAAGCAGCCGGGGGGCAAGTGAGTGAAACTATAAAACCTCCTTCGACCTCCACTGGTGAATTTCCAATTGGACAAGAGCAACTTGCTTCAATTTCAAGGGAGCATGATGCTGCTGCTTTGCAGCAATATGGAGGGGTTGCAGGGATATCAAATTTATTGAAAACCAATTTAGAGAAGGGGATTCATGGTGATGATGCTGACTTATCAAGACGGAGGACTGCATTGGTTCCAACAATTATCCTCGAAAGAAAGGAAGAAATGTTTATGTGGGATGCTTGCAAGGATCTGACCTTGGTTATTTTAATGGTAGCTGCAGCAGCTTCATTGGCACTGGGGATAAAATCTGAGGTATTATGTGTCTTTGTAAGGGTTATTAGAGGTGGTAGAAGGGTTGAGATCTCGATATATGATATTGTTGTTGGGGATGTTATACCCCTTAATATTGGTAACCAGGTCCCTGCTGATGGAATTCTGATCACTGGTCACTCTCTTGCAATTGATGAATCAAGCATGACGGGGGAGAGTAAAATTGTCCATAAGGATTCTAAAGATCCTTTCCTGATGTCTGGATGTAAAGTTGCAGATGGCAGTGGCACTATGCTGTTAATGACATGTAATGGTTGCTTTGCTGCAAGTCCGCTTAAATGGTGTAGCCACCTTTATTGGTATTGTTGGACTCACTGTTGCTGTTGCTGTCCTCATTGTGCTATTGAGCAGATGGGACGGTTCCAATTTAAAGCGGGCAAGACTAAAGTTGGTGATGCTATTGATGGAGCCATTAAGATAGTAACTGTTGCGGTCACCATTGTAGTGGTTGCTGTGCCTGAGGGGCTCCCACTTGCAGTTACTTTAACGTACGGAGGCTTTCTGCCTGTGAGACAATGGGCTCTGCTACAACCATATGCAGTGATAGACTGGGACATTGACTATGAATCAGATGATCCTCCTCACCAGTTGGAGGGCTCTCCTATGGTACGCTCCCTGCTCATTGAAGGTGTTGCACAGAACACTAATGGTAGTGTTTTTGTACCTGAGGGTGCTAGTGATGTTGAGCTTGGGATGAATTTTGCGGCTGCTCGGTCAGAATCGTCAATTATTCATGTCTTCCCATTCAATTCAGAGAAAAAAAGAGGCGGAGTTGCAATACAGACGGCTGACTCTGATGTCCATATACATTGGAAAGGTGCTGCTGAGATAGTTCTAGCCTGTTGTACAGGGTATATGGATGCAAATGACCAGTTGGTGGAGATGGATGAGGAGAAGTTTGGAAATCTTGTCAGACTACACATCTCTCTTTCTCTCTTCCTGTTTTCCTCTGTCCCTTGTCCTATTGGTGGATTCTATAAGATCCTTGTAGACCTGGGTGTCAAAGATTCAGTGCAGCTTTGCCAAAAAGCTGGGGTTAAGAGAGGAGAAAGAGTGGGTGTGATTGCAAGAAAAGGGAATCAGAAAAATAATAAGAGGGATATTGAGTGGCCATACCTGACTTGGCGGGAGGCTAGAGAAGAAGGAAATGATAATATCCGTAAGTTGGATATGGGGGAGGATGAAATGTTTTGTCTTAATTCACAATATTCCCCTGGATGCCATTGGTTAAAATGGTCACGGGTGACAATGTCAAAACTGCAAAAGCAATTGCTGTTGAATGTGGAATTCCTTAGTTCATATGCGGATGCTACAGAGCCGAACATCATTGAAGGGAAAACATTCCGTGCCTTGTCAGATGCGCAGAGAGAAGAAATTGCTGAAGCAATATCGGTTATGGGACGGTCATCTCCCAATGACAAACTATTGCTAGTACAAGCATTGAGGAGGAAGGGTCATGTTGTGGCTGTAACTGGGGATGGAACGAATGATGCTCCTGCACTTCATGAGGCCGATATAGGTCTTGCAATGGGTATTCAAGGTACAGAAGTCGCCAAAGAGAGCTCTGATATCATTATTTTGGATGACAATTTTGCTTCAGTTGTGAAGGTTGTCAGATGGGGGCGGTCTGTATATGCAAATATTCAGAAATTCATCCAGTTTCAGCTGACAGTCAATGTGGCAGCGCTTGTTATAAATGTTGTTGCTGCAGTTTCCTCTGGTGATGTCCCACTAAATGCAGTGCAGCTTCTCTGGGTAAATCTTATCATGGATACTCTGGGAGCACTAGCCTTGGCAACTGAACCACCAACTGATCACCTGATGGATCGGTCTCCTGTGGGTCGAAGAGAACCTCTCATAACAAATATTATGTGGAGGAATTTGCTGATTCAGGCAATGTATCAAGTGTCTGTCTTGCTTGTTCTCAATTTCCGAGGCAGGAGCATTCTGAGTCTGAGGCATGAGCCCATTGAGCATGCAGTCAAAGTAAAAAACACTTTGATCTTCAATGCATTTGTTCTCTGTCAAATCTTTAATGAATTTAATGCACGAAAGCCAGATGAATTCAACATTTTTAAGGGAGTCACAAGAAACTACCTATTTATGGGGATAGTGGGATTAACTGTTGTGCTTCAGATTATCATCATTGAATTTCTTGGGAAGTTCACTTCAACAGTCAGGTTAAATTGGAAGCAGTGGCTCATCTCTGTCATTATTGGACTTATTAGTTGGCCTCTTGCTGTCGTTGGGAAATTGATACCAGTACCAGCAACTCCCATCAATAACATTTTTTCAAGATTAAATTTTGGTCGAAGTTCAAGAAGGAAGGAACCTGAGGCTTCTCAATAG 3015 0.4365 MSFLNGSSPRRPAAENDIEAGPASRRSSDVDDSDFSSPFDIARTKNASIERLRRWRQAALVLNASRRFRYTLDLKKEEEKKQILRKIRAHAQAIRAAYLFKAAGGQVSETIKPPSTSTGEFPIGQEQLASISREHDAAALQQYGGVAGISNLLKTNLEKGIHGDDADLSRRRTALVPTIILERKEEMFMWDACKDLTLVILMVAAAASLALGIKSEVLCVFVRVIRGGRRVEISIYDIVVGDVIPLNIGNQVPADGILITGHSLAIDESSMTGESKIVHKDSKDPFLMSGCKVADGSGTMLLMTCNGCFAASPLKWCSHLYWYCWTHCCCCCPHCAIEQMGRFQFKAGKTKVGDAIDGAIKIVTVAVTIVVVAVPEGLPLAVTLTYGGFLPVRQWALLQPYAVIDWDIDYESDDPPHQLEGSPMVRSLLIEGVAQNTNGSVFVPEGASDVELGMNFAAARSESSIIHVFPFNSEKKRGGVAIQTADSDVHIHWKGAAEIVLACCTGYMDANDQLVEMDEEKFGNLVRLHISLSLFLFSSVPCPIGGFYKILVDLGVKDSVQLCQKAGVKRGERVGVIARKGNQKNNKRDIEWPYLTWREAREEGNDNIRKLDMGEDEMFCLNSQYSPGCHWLKWSRVTMSKLQKQLLLNVEFLSSYADATEPNIIEGKTFRALSDAQREEIAEAISVMGRSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRSPVGRREPLITNIMWRNLLIQAMYQVSVLLVLNFRGRSILSLRHEPIEHAVKVKNTLIFNAFVLCQIFNEFNARKPDEFNIFKGVTRNYLFMGIVGLTVVLQIIIIEFLGKFTSTVRLNWKQWLISVIIGLISWPLAVVGKLIPVPATPINNIFSRLNFGRSSRRKEPEASQ 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi13g00007 1004 MobiDBLite consensus disorder prediction 1 37 - -
Sebi13g00007 1004 PANTHER CATION TRANSPORTING ATPASE 420 521 - -
Sebi13g00007 1004 Pfam Cation transporting ATPase, C-terminus 798 975 IPR006068 -
Sebi13g00007 1004 FunFam Calcium-transporting ATPase 47 103 - -
Sebi13g00007 1004 SUPERFAMILY Calcium ATPase, transduction domain A 221 302 IPR008250 -
Sebi13g00007 1004 Gene3D - 759 966 - -
Sebi13g00007 1004 NCBIfam HAD-IC family P-type ATPase 679 793 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi13g00007 1004 Gene3D - 206 307 - -
Sebi13g00007 1004 Pfam Ca2+-ATPase N terminal autoinhibitory domain 37 79 IPR024750 GO:0005516
Sebi13g00007 1004 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 424 530 IPR023299 GO:0000166
Sebi13g00007 1004 Pfam haloacid dehalogenase-like hydrolase 680 727 - -
Sebi13g00007 1004 SUPERFAMILY Calcium ATPase, transmembrane domain M 143 977 IPR023298 -
Sebi13g00007 1004 Gene3D - 316 387 - -
Sebi13g00007 1004 SUPERFAMILY HAD-like 668 818 IPR036412 -
Sebi13g00007 1004 PRINTS H+-transporting ATPase (proton pump) signature 713 729 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi13g00007 1004 PRINTS H+-transporting ATPase (proton pump) signature 745 770 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi13g00007 1004 Gene3D - 445 528 IPR023299 GO:0000166
Sebi13g00007 1004 Pfam E1-E2 ATPase 222 300 - -
Sebi13g00007 1004 PRINTS P-type cation-transporting ATPase superfamily signature 267 281 - -
Sebi13g00007 1004 PRINTS P-type cation-transporting ATPase superfamily signature 713 732 - -
Sebi13g00007 1004 PRINTS P-type cation-transporting ATPase superfamily signature 737 749 - -
Sebi13g00007 1004 MobiDBLite consensus disorder prediction 22 37 - -
Sebi13g00007 1004 Gene3D - 47 102 - -
Sebi13g00007 1004 Gene3D - 660 758 IPR023214 -
Sebi13g00007 1004 Pfam Cation transport ATPase (P-type) 453 505 - -
Sebi13g00007 1004 FunFam Calcium-transporting ATPase 730 979 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi13g00007 Sebi-Chr13 95647 114043 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi13g00007 1 1003 Primary Pumps ATPases AT5G57110 52.682 0.0 1007
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi13g00007 K01537 - zju:107429495 1049.27