Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi139g00031 ATGCCACTGGAAAATAGGGTGCTTGACCCTAAGAAGTCTCAGAACATTGCCATTTTGCTTCGGGCACTGAATGTAACTATTGATGAAGTTTGTGAAGCCCTCAGGGAAGAAAATGGAGACCGCATAGCTGGATTTATTTTAGAACCTATCCAAGGTGAAGCTGGGCTTGGAATGGTGCTGCATCTTTATTTTTCCACTGATCTAATTGCACACACAATAAGAAAGGAAAATGATTCAACTCGTCCTATCTTGCTAAATGGGGCCCTCAGAAAGAGGAAGCGTGTTGTCCCTCCATTGGCTCTGGATTCTCTATTGAGAGTCACTTTCCCTCTTCCTTCAGCTCGGGTCAAGGCCACCGAAAGACTTGAAGCTGTATATCCAACATTAAAGGAGGTAGCCCTTGCAGGGTCCCCTGGAAGCAAAGCAATAAAGCATCTTGCTCAACAAATATTAAGCTATGCAATTAAAGCTGCAGGAGAAGGTGATGTCAAGTTAATGTAG 501 0.4391 MPLENRVLDPKKSQNIAILLRALNVTIDEVCEALREENGDRIAGFILEPIQGEAGLGMVLHLYFSTDLIAHTIRKENDSTRPILLNGALRKRKRVVPPLALDSLLRVTFPLPSARVKATERLEAVYPTLKEVALAGSPGSKAIKHLAQQILSYAIKAAGEGDVKLM 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi139g00031 166 Gene3D - 2 79 - -
Sebi139g00031 166 SUPERFAMILY Formin homology 2 domain (FH2 domain) 5 41 - -
Sebi139g00031 166 PANTHER TRANSMEMBRANE PROTEIN 214 77 162 IPR019308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi139g00031 Sebi-Chr139 1082218 1084413 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi139g00031 4 48 FH2 protein (formin) Gene Family AT3G25500 75.556 8.78e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi139g00031 - - lja:Lj2g3v2560090.1 144.05