Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi139g00002 ATGTCACAGAGTCCCACTATGAGTTTCTGGGATCTTTCTTGGGAAGAGCATCCCAAGGTATTGTCAGTGTTTGAGAACAGTGGAAGAAAACTACACACCACTAGGTCATGGGGATTCATGGGGCTAGAGGAGGATAATGGGGTGATCTCATCCAGCTCAATTTGGAACAAAGCCAGATTTGGTGAAGGTGTGATTATAGGAAACCTTGATACAGGTGCTTGGCCTGAATCCAAGAGCTTTAGTGATGAAGGGTTTGGACCAATTCCATCAAAGTGGAGAGGAATCTGTGATAACGGGATTGATGCTAGTTTTCACTGCAACAGGAAGCTAATAGGGGCAAGATACTTCAACAAAGGTTATGCATCTGTTGCTGGCCCACTCAATTCCTCCTTTGACTCACCTAGAGACAATGAAGGCCATGGATCCCACACTCTATCAACAGCTGGTGGTAACATGGTACCTGGTGTCAGTGTCTTTGGCCAGGGCTCTGGAACAGCAAAAGGTGGCTCACCAAGAGCCAGGGTGGCAGCATACAAGGTCTGTTGGCCCCCAATTAGTGGTGATGAGTGCTTTGATGCAGATATACTTGCAGGTTTTGATATGGCCATCCATGATGGTGTTGATGTGTTGTCTGTGTCACTTGGTGGCTCTGCCTCTGCATTTTTCAATGATAGTGTTTCTATTGGATCCTTCCATGCTGCTAAGAAAGGGATTGTGGTTGTTTGCTCTGCTGGCAATAGTGGACCTGCTGATGCTACTGCAGAAAACCTTGCACCATGGTATATCACAGTTGGTGCCAGCACAATGGATAGAGAGTTCCCTAGTTATGTTGTCCTTGGTAACAAGATAAGCTTGAAGGGTGCAAGTTTATCAGCTGCAAGATTGGAACACAAGTTCTATCCAATTATTAAAGCTACAGATGCTAAGTTGGCTAGTGCAACAGCTGAAGATGCTGTGCTGTGCCAAAATGGAACTCTGGATCCCAATAAGGTAAAAGGAAAGATTGTAGTGTGCCTCCGAGGGATAAATGCACGAGTGGACAAGGGAGAGCAAGCTTTGCTAGCTGGTGCTGTGGGAATGGTCCTTGCCAATGATAAGACTAATGGCAATGAAATTTTAGCTGATCCTCATCTCCTTCCTGCTTCTCATATCAATTTCACTAATGGTGTTGCTGTCTTTGATTACATCAACTCAACCAAGTTCCCTGTGGCTTATATTACACATCCAAAGACAAAATTGCATACTAAGCCAGCCCCCTTCATGGCAGCATTTTCATCCAAAGGACCAAACACTATTGTACCAGAGATCCTAAAGCCTGATATCACTGCACCAGGAGTGTCAGTTATAGCTGCCTACACTGAAGCTGAAGGGCCAACTAATCAAGAGTTTGACAGTCGCCGGATTCCATATAACTCAGTCTCAGGCACATCAATGTCATGCCCTCACATTTCAGGCATTGTGGGTTTGTTGAAAACCCTATATCCTTCATGGAGTCCTGCTGCTATTAAATCAGCAATCATGACCACAGCTACAACACTAGATAATGAGGTGGAGCCACTGTTGAATGCTACTGACAGCCAGGCAACACCATTTAGTTATGGGGCAGGACATGTTGAACCAAACAGAGCAATGGATCCTGGCCTTGTCTATGACACAACAATGGATGATTACCTGAACTTGTTGTGTGCTTTAGGTTATAATGAAACACAAATCTCAATGTTTACAGAAGGTCCTTATCAATGCCACAAGAATTTTAGTCTCCTCAACCTAAACTATCCTTCAATCACAGTCCCAAATCTCTCAGGGTCAGTAACAGTTACAAGGACATTAAAAAATGTTGGTTCTACAGCAACATATATTGCTCATGTTCAAAACCCAAATGGGATCAGCATTTCAGTGGAGCCAAGCATCTTGAAGTTCAAAAGGGTTGGTGAAGAAAAGAGCTTTAAAGTAACCTTGAAAGTCAAGCAAGGAAAAGCAACAAATAACTATGTGTTTGGAAAGTTGATATGGTCAGATGGCAAGCATTATGTCAGGAGTCCTATAGTTGTGAAGGCACTCTAG 2064 0.438 MSQSPTMSFWDLSWEEHPKVLSVFENSGRKLHTTRSWGFMGLEEDNGVISSSSIWNKARFGEGVIIGNLDTGAWPESKSFSDEGFGPIPSKWRGICDNGIDASFHCNRKLIGARYFNKGYASVAGPLNSSFDSPRDNEGHGSHTLSTAGGNMVPGVSVFGQGSGTAKGGSPRARVAAYKVCWPPISGDECFDADILAGFDMAIHDGVDVLSVSLGGSASAFFNDSVSIGSFHAAKKGIVVVCSAGNSGPADATAENLAPWYITVGASTMDREFPSYVVLGNKISLKGASLSAARLEHKFYPIIKATDAKLASATAEDAVLCQNGTLDPNKVKGKIVVCLRGINARVDKGEQALLAGAVGMVLANDKTNGNEILADPHLLPASHINFTNGVAVFDYINSTKFPVAYITHPKTKLHTKPAPFMAAFSSKGPNTIVPEILKPDITAPGVSVIAAYTEAEGPTNQEFDSRRIPYNSVSGTSMSCPHISGIVGLLKTLYPSWSPAAIKSAIMTTATTLDNEVEPLLNATDSQATPFSYGAGHVEPNRAMDPGLVYDTTMDDYLNLLCALGYNETQISMFTEGPYQCHKNFSLLNLNYPSITVPNLSGSVTVTRTLKNVGSTATYIAHVQNPNGISISVEPSILKFKRVGEEKSFKVTLKVKQGKATNNYVFGKLIWSDGKHYVRSPIVVKAL 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi139g00002 687 ProSiteProfiles Serine proteases, subtilase domain profile. 36 544 - -
Sebi139g00002 687 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 15 684 IPR045051 -
Sebi139g00002 687 FunFam Subtilisin-like protease SBT1.5 63 320 - -
Sebi139g00002 687 Gene3D - 270 414 - -
Sebi139g00002 687 Gene3D - 561 687 - -
Sebi139g00002 687 FunFam Subtilisin-like protease SBT1.5 561 687 - -
Sebi139g00002 687 Gene3D Peptidase S8/S53 domain 63 557 IPR036852 GO:0004252|GO:0006508
Sebi139g00002 687 CDD PA_subtilisin_like 276 406 - -
Sebi139g00002 687 ProSitePatterns Serine proteases, subtilase family, serine active site. 475 485 IPR023828 -
Sebi139g00002 687 CDD Peptidases_S8_3 30 511 IPR034197 -
Sebi139g00002 687 Pfam Fibronectin type-III domain 589 684 IPR041469 -
Sebi139g00002 687 Pfam PA domain 321 390 IPR003137 -
Sebi139g00002 687 FunFam subtilisin-like protease SBT1.5 270 413 - -
Sebi139g00002 687 Pfam Subtilase family 61 522 IPR000209 GO:0006508|GO:0008236
Sebi139g00002 687 PRINTS Subtilisin serine protease family (S8) signature 61 80 IPR015500 -
Sebi139g00002 687 PRINTS Subtilisin serine protease family (S8) signature 136 149 IPR015500 -
Sebi139g00002 687 PRINTS Subtilisin serine protease family (S8) signature 474 490 IPR015500 -
Sebi139g00002 687 SUPERFAMILY PA domain 317 401 IPR046450 -
Sebi139g00002 687 SUPERFAMILY Subtilisin-like 31 548 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi139g00002 Sebi-Chr139 70371 77887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi139g00002 11 685 Subtilisin-like Serine Gene Family AT2G04160 66.029 0.0 926
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi139g00002 - - gmx:100794807 1201.42