Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi138g00068 ATGGCGAGAATGATCTCCAACAACAACAATGAGGCTGATAGTAATGCATCAACTGATGAGGGTGAGTCAAGAGGTCGTATGAAAAAGGGGCCTTGGACCCCAAAAGAAGATAAGATTTTGATAGAGTACGTGAAAAAATATGGTGAAGGGAATTGGAACTCTGTTCAGAAGAATTCCGGGTTGTTAAGGTGTGGTAAAAGTTGCAGACTTAGATGGGCCAATCATCTAAGGCCTAATCTGAAGAAAGGCGCATTTTCTCAAGAAGAAGAAAAAATTATCATTGACCTTCATGCTAAGCTTGGAAACAAATGGGCTCGAATGGCCTCACAGTTACCTGGGAGGACCGACAATGAAATAAAGAACTTTTGGAATACTCGAATGAAAAGGCTCCAAAGAGCAGGGTTACCCCTTTATCCCCCAAAAGTCCATATTGAAGCCAATGCATACCATCAACATCTACAACAACAACACCACTTGGAGAATCCTTACCCTTCTTCATCTTTATCGTCATTTTCTTTACTCTTATCTTCTTGTTATCCCAAGAAGCTCAATGATTCAAGCCATTATTCTACTACAAACCCTCTAAAAACTCATCCTAATACTACTAATTATTACACCGATCCATCCCAGCAGTTCAAGCTTTCCAATGAAAATAGAGGGAATAGGAATCTTGCTTTGCCATTGTCCACTGTCTCTCCATATGGATCTTCATCCTCGACTCTTTTCAACCAGAATTTTGCCGCTCATGATTCAGCTCCAACTGATCATGATTCACATGATTACCAATGTTCTGGAAGCTATAATCTTGGATTCATTTCCAGATCTCCATATGAACCCCTTCCTAATTTGGTGCTAGGCTCCAGTAATGAAATCTCTTCTAGTCAAATTACAACACTTGGCCCAACAACTCCTGCTTCATCCAATGCTAGTGGTGTTGATGGCTTCACTGGAGCTTTAAGCATGGTTAATGACTATAATGAAGTTGCGTCGTTATCTCCTCAAAGAAATAGCGGCCTATTGGATGCTTTAGTAGAGGAGGCTAAAATTCTTTCTCGCAGAGACAAATCTAAGAGTGAGGATTTGATTGTAGCAGGGAATTTATCTTATAAAAGGAAAAACATGATGAGTGAGGAATATGCAAAGGATGAAGACACTATGCTTGTTGCGTCAGTTATTAAGAACAATGGGGACATTGCTAATGAAAACCAAAGGGATGAATTTAACTCTTCTCAATTGTCAACAGGGAAGAAACCAATTGGCGAGGATCCGTTGGAGGAGATGAATTCCATGGATGATGATGACTTGTTTAGCTTGCTCAACAATTTTCCCTCTGAAATGCCAATGCCAGGGTGGTATCGTAGAGGAGGAAGTCAGTCATTGGGACATGAAACTCAACCCGATGCTTCTTCACCTGGACCTACTCATCAAGATTTTGCTTGGACTCTCGGGACTTGCTGGAACAATATGCCTGACATATGCTAA 1482 0.4082 MARMISNNNNEADSNASTDEGESRGRMKKGPWTPKEDKILIEYVKKYGEGNWNSVQKNSGLLRCGKSCRLRWANHLRPNLKKGAFSQEEEKIIIDLHAKLGNKWARMASQLPGRTDNEIKNFWNTRMKRLQRAGLPLYPPKVHIEANAYHQHLQQQHHLENPYPSSSLSSFSLLLSSCYPKKLNDSSHYSTTNPLKTHPNTTNYYTDPSQQFKLSNENRGNRNLALPLSTVSPYGSSSSTLFNQNFAAHDSAPTDHDSHDYQCSGSYNLGFISRSPYEPLPNLVLGSSNEISSSQITTLGPTTPASSNASGVDGFTGALSMVNDYNEVASLSPQRNSGLLDALVEEAKILSRRDKSKSEDLIVAGNLSYKRKNMMSEEYAKDEDTMLVASVIKNNGDIANENQRDEFNSSQLSTGKKPIGEDPLEEMNSMDDDDLFSLLNNFPSEMPMPGWYRRGGSQSLGHETQPDASSPGPTHQDFAWTLGTCWNNMPDIC 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi138g00068 493 SUPERFAMILY Homeodomain-like 26 123 IPR009057 -
Sebi138g00068 493 SMART sant 81 129 IPR001005 -
Sebi138g00068 493 SMART sant 28 78 IPR001005 -
Sebi138g00068 493 FunFam MYB-related transcription factor 28 81 - -
Sebi138g00068 493 MobiDBLite consensus disorder prediction 399 418 - -
Sebi138g00068 493 Pfam Myb-like DNA-binding domain 29 76 IPR001005 -
Sebi138g00068 493 Pfam Myb-like DNA-binding domain 82 125 IPR001005 -
Sebi138g00068 493 MobiDBLite consensus disorder prediction 1 32 - -
Sebi138g00068 493 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 76 IPR017930 -
Sebi138g00068 493 CDD SANT 31 76 IPR001005 -
Sebi138g00068 493 CDD SANT 84 125 IPR001005 -
Sebi138g00068 493 FunFam Transcription factor MYB97 84 161 - -
Sebi138g00068 493 Gene3D - 84 160 - -
Sebi138g00068 493 MobiDBLite consensus disorder prediction 449 475 - -
Sebi138g00068 493 ProSiteProfiles Myb-like domain profile. 77 127 IPR001005 -
Sebi138g00068 493 ProSiteProfiles Myb-like domain profile. 24 76 IPR001005 -
Sebi138g00068 493 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 8 463 - -
Sebi138g00068 493 MobiDBLite consensus disorder prediction 458 475 - -
Sebi138g00068 493 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 131 IPR017930 -
Sebi138g00068 493 MobiDBLite consensus disorder prediction 17 32 - -
Sebi138g00068 493 MobiDBLite consensus disorder prediction 1 16 - -
Sebi138g00068 493 Gene3D - 28 81 - -
Sebi138g00068 493 MobiDBLite consensus disorder prediction 399 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi138g00068 Sebi-Chr138 1305946 1308934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi138g00068 25 143 MYB Transcription Factor Family AT2G32460 84.167 6.51e-68 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi138g00068 Myb_DNA-binding 3.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi138g00068 K09422 - gmx:100784779 544.273