Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi138g00051 ATGACTTTTGGTGCTTTCAGCGGAAGGCCTGCCAGTGTGAACATTGGTGCAGTTTTCACCTTCGATTCGGTCATAGGTAAAGCTGCGAAGGCAGCTATGGAAATGGCTGTTTCTGATGTCAATTTGGACCCAAAAGTTCTCAACGGGACCAAGCTCAAGTTGATAATGAGTGATGGCATGTGCAATGCCTTTCTGGGATCAACAGGAGCTTTTCAGATACTTGAGCAAGGGGTTGCAGCCATAATTGGCCCACAGTCATCTGCCATGGCTCATACAATTTCCCAAATTGCTGATGCTGTCCAGGTTCCTCTTATTTCATATGCTGCCACTGATCCAACACTATCCTCCCTTCAGTTTCCTTTATTTTTTCGTACTATACAAAGTGACTTGGAGCAAATGACCGCAATGGCCAACCTAATTGATTTTTATGGATGGAAAGAGGTCATTGCTGTATACTTGGATGATGATTATGGAAGAAATGGAATATCTGCTTTGGTTGCACTTTCAATTGACAAATTTATAGAACTACATAATAAATTTACCTTCTTGCTTCATGATAATAATAAGCTGCCTCAAACAGAAGGAATTGGTATTCAGCTTGAGAGCTCAAAGTCTTTGCTGGTGGATCTGATCTGTTATTCAGGATTCTCAGTTGTGCCCCATGAAGTTCTTAAAAGAAAAGGACATAGCAGGATTTCCCAAGATCAGAAGCTTGATAATATTACTTGGCCAGGTGGGAAGACTGAAAGACCACGTGGCTGGGGGTACTGCATTGATATCTTCACGAAAGCCCTCGAATTTATTCCATATGATGTTCCTTATGCCTTCAAGCCTGTTGGGAATGGTAAAGCAAATCCCAATTATGATGCACTTGTGAAAATGATTGATGACAATATATATGATGCAGTTGTTGGAGACATTGCAATTGTAACAAACCGTACAAAAATTGTGGATTTTTCTCAGGCCTTTTGCATCATCCAGCCTTGTTATAGTGGCTCCTATCAACAGTTGGTTATATGGATTCTTGAGCACCGAGTCAATGATGACTTCCATGGTCCTCCTAAGAGGCAACTTGTGACAATGTTTATGTTCAGGCCTCTCAACACTGTTTTAAGGACAAATCCTAGCTATACAGCAAGCTTGACTTCAATTCTTACAGTGGAGCAGCTTTCATCACCCATCACAGGAATTGATAGGCTTGATTGCAAGTAA 1212 0.4125 MTFGAFSGRPASVNIGAVFTFDSVIGKAAKAAMEMAVSDVNLDPKVLNGTKLKLIMSDGMCNAFLGSTGAFQILEQGVAAIIGPQSSAMAHTISQIADAVQVPLISYAATDPTLSSLQFPLFFRTIQSDLEQMTAMANLIDFYGWKEVIAVYLDDDYGRNGISALVALSIDKFIELHNKFTFLLHDNNKLPQTEGIGIQLESSKSLLVDLICYSGFSVVPHEVLKRKGHSRISQDQKLDNITWPGGKTERPRGWGYCIDIFTKALEFIPYDVPYAFKPVGNGKANPNYDALVKMIDDNIYDAVVGDIAIVTNRTKIVDFSQAFCIIQPCYSGSYQQLVIWILEHRVNDDFHGPPKRQLVTMFMFRPLNTVLRTNPSYTASLTSILTVEQLSSPITGIDRLDCK 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi138g00051 403 SUPERFAMILY Periplasmic binding protein-like I 9 172 IPR028082 -
Sebi138g00051 403 Gene3D - 15 127 - -
Sebi138g00051 403 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 234 323 IPR015683 -
Sebi138g00051 403 Pfam Receptor family ligand binding region 30 168 IPR001828 -
Sebi138g00051 403 SUPERFAMILY Periplasmic binding protein-like II 249 325 - -
Sebi138g00051 403 Gene3D - 128 182 - -
Sebi138g00051 403 Gene3D - 234 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi138g00051 Sebi-Chr138 904934 908958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi138g00051 215 400 Ion Channels AT2G32400 38.376 1.34e-51 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi138g00051 K05387 - gmx:100784247 268.085