Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi138g00024 ATGAGGGGACATACGGAATATTATCACAACCTTTTGTCTGCAAGGCAGTGCAGTGGCATCACAGTCAAACATGATGGGAACTTTGGAAAGGGTGTATATGCTACCATGGACTTTAAAGAGGGGGGACTTGTTCTGAAGGATCACATGCTTGTGGGGGCTCAACACTCTTTCAACAAGATTGATTGTTTTGTCTGTAGCTTCTGCTTTCGTTTTATTGGTTCCATAGAACTTCAAATTGGAAGGAGGCTTTACTTGCAAGAATTAAGGGCCAATGAGGGTCATGGTTGTGATGTGGGAAACTTTTCAGGCTCTTCTAAAGGCTGCCATGAAATGGATTCATCTGATGAAGAGGAGAGCACTGAGCAATTTGGTTCTGGTAGTTCCAAAACTAAAGTTCCTCTCCCTGAAGGTGTTGTGGAATCATTGATGAATGGCCAGTTGATATTGCCCTACTCTGAGAAGTTCTCTTTGCCGCCAGCTGTTCCATGCCCTGGTGGATGCGGAGAAGCTTACTATTGCAGCACGTCATGCGCAGAGGCTGATTGGGAATCCTCCCATTCTTTACTCTGTACTGGCGAGGGTTCTGATACTGCACCTAGGGGGGCACTCCTCAAATTCATCAAACATGCTAATGAAACAAATGATATATTCCTCCTTGCTGCAAAGGCAATTTCTTCTACCATATTAAGGTACCGCAGGATAAAAGCAAACTGTCTTGAAGAGCAAGTAAAATACGAAACATCCTGTGATCCAAACCAATGTAATCTCTCTCTTCTTTTGGAAGCTTGGAGGCCTATATCAATGGGACACAAGAAAAGGTGGTGGGACTGCATTGCATTGCCAGATGATATTGATTCTTCTGATGAAGCTTCATTCAGGATGCAAATAAAAGAGCTGGCATTCGAGTCTCTCCAACTTCTTAAGACAGCTATATTTGACAAGGAATGTGAGCCATTATTCTCCCTTGAAATTTATGGACACATCATTGGCATGTTTGAGCTGAATAATCTCGATTTGGTTGTAGCTTCTCCTGTGGAGGATTACTTTTTATACATTGATGATATGACAGATCCTGATAAGGAAGAAGCTGAGAAAATTACACAACCAATTCTGGACGCTCTTGGTGAAGACTATTCTATTTGTTGTCAAGGAACTGCATTTTTTCCTCTGCAAAGCTGCATGAACCATTCCTGTTGTCCTAACGCCAAAGCTTTCAAAAGAGATGAGGATAGAGATGGCCAAGCAACAATAATTGCGCTGAGGTCCATTTGTAAAGGAGAAGAGATAACCATCTCATATGTTGATGAGGACCTTCCATTTGAAGAGAGACAGGCATCCCTTGCAGATTATGGTTTTAGATGCAGGTGTCCAAAGTGCATTGAAGAAGAGCCATAA 1395 0.4244 MRGHTEYYHNLLSARQCSGITVKHDGNFGKGVYATMDFKEGGLVLKDHMLVGAQHSFNKIDCFVCSFCFRFIGSIELQIGRRLYLQELRANEGHGCDVGNFSGSSKGCHEMDSSDEEESTEQFGSGSSKTKVPLPEGVVESLMNGQLILPYSEKFSLPPAVPCPGGCGEAYYCSTSCAEADWESSHSLLCTGEGSDTAPRGALLKFIKHANETNDIFLLAAKAISSTILRYRRIKANCLEEQVKYETSCDPNQCNLSLLLEAWRPISMGHKKRWWDCIALPDDIDSSDEASFRMQIKELAFESLQLLKTAIFDKECEPLFSLEIYGHIIGMFELNNLDLVVASPVEDYFLYIDDMTDPDKEEAEKITQPILDALGEDYSICCQGTAFFPLQSCMNHSCCPNAKAFKRDEDRDGQATIIALRSICKGEEITISYVDEDLPFEERQASLADYGFRCRCPKCIEEEP 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi138g00024 464 SUPERFAMILY HIT/MYND zinc finger-like 165 191 - -
Sebi138g00024 464 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 4 463 IPR044237 GO:0008168
Sebi138g00024 464 ProSiteProfiles SET domain profile. 18 434 IPR001214 GO:0005515
Sebi138g00024 464 Pfam SET domain 356 433 IPR001214 GO:0005515
Sebi138g00024 464 CDD SET_SMYD 373 459 - -
Sebi138g00024 464 Gene3D - 152 192 - -
Sebi138g00024 464 MobiDBLite consensus disorder prediction 107 131 - -
Sebi138g00024 464 SUPERFAMILY SET domain 18 457 IPR046341 -
Sebi138g00024 464 Gene3D SET domain 354 463 IPR046341 -
Sebi138g00024 464 Pfam MYND finger 162 190 IPR002893 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sebi138g00024 SET 4.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi138g00024 - - gmx:100803651 796.193