Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi137g00081 ATGGGAAGGGAAAGAGGCCCGAAAAAGGTGGCAATCACTTTTGGAAATCCATTGGGCTTGGATTTAAGACTCCCAAAGATGCCATTGAAGAATATGCACAGATACTCTGGGATGGCTTCTACGGTGAAGCACCTTAGTGGGTGGTCCACCACTAAGGCAACGAATTTAACCTGGTATTGGGGGTTTCATTTACCGGATAGAATTCAAAGTGGAGGGAGAAGCTACTCAGAAGGCGAAGCAAGAGCGCAGATCTGGTACTCAAGACGCCCCAAGGTTGTATTTGTGGAGAACATAATGGAAGGCTCCAATCAAGAATCTGAACATAATGGTGGTCCATCTTATGAACACGGTGATAGTGGTTCATTTTTGCAAGAGGCCGAAGACAATAATCGTGGATACCTGGTGAACCAAGGCGGTTGTGGTGTGTATTTGGTGGATGGAGAATTTGATGAAAATTGGAATGAAGGAGAAAATAATGATGATGGTGATGAAGTTTCTAAAACCAGTATTGATGGTTTAGAAGATATCAAAGCAATTGATTTGCAGAAATTCAGCCCCCATCAGAAAAGTAATTTCGATTTCTGTAGTGTTGATGTTGCATACCTATTCTACTTTTGGTATGCTTGGGCTAACGAATTTGCATCTCGACGGGGGAAGGTAATCACGAGTAAGAAGACTGGTATGGTGTTGCAACAAAATTTCTTTTGTAATAGGGAAGGCATACGTCTAGAGGATGGTGTCCCATTGGAAGAAAAACAACATGAGCCGAAAGCTGTAACTAGATGTGGGCGCCGAGCAGAATTTCGGATGAACAATATGCTTAAAGTCGGCATTGGACCTCCTCAAGTCTTTGAGTCGTTTGCTAATCAGTGTGGGGGTTATGAAAAGATAGGTTTCCGGAAGAAAGATATATATAACCAGATCATTCAACAACGGCATAAACCATGGATTAGGGACATGTATGAGAAGAGGGAAATGTGGACCACCGCTTACATGAGGGGGAAATTTTTTGCTGGGTTTAGGACAACCTCGAGGTGTGAAGTTTTGCGTCATCTAGACATCAAAGAGCTTCCTAAGTCTGTTGTGCTTCGCAGATGGACGAAGGGTGCCAAAGACATGGTGAATGTGAGTAGTGGTCAGTCATCTGCTGGTTGGGATTCACAGAAAGTTTTCAGGGTTGAGGACCTAAATTTCCTGTATAGGAAATTATCAGTTGTAAATGGTGATACAGTTGAAGATTATTATGACACTCGTGAGAAACTACTGGAAGAATATGAAATGAAGAAGGCAAAGAAAGCACAACAAAGTCCTGCCGATTCTGAACCAGTAGCTTCTGCTAACGAAGGTTTGAGGGATCCATTGCGTGCTAGAGAAAAGGGAACTAGTCGAGCAAGTATGTCAGCCGGAGGCTTAAGAGTTAAGCGGACAACAAAGTGCTCGTGGTGTAGGGTTGCAGGCCATAATCGAGTGACTTGTCCACTCCGAGCACAAAGTCAACAGATGAGCCAGGCAGAACATCAAAGCTCAATGTTTGATGAGGAAGAAGGCAACTATTATAATGTATACATTAATTGA 1575 0.4305 MGRERGPKKVAITFGNPLGLDLRLPKMPLKNMHRYSGMASTVKHLSGWSTTKATNLTWYWGFHLPDRIQSGGRSYSEGEARAQIWYSRRPKVVFVENIMEGSNQESEHNGGPSYEHGDSGSFLQEAEDNNRGYLVNQGGCGVYLVDGEFDENWNEGENNDDGDEVSKTSIDGLEDIKAIDLQKFSPHQKSNFDFCSVDVAYLFYFWYAWANEFASRRGKVITSKKTGMVLQQNFFCNREGIRLEDGVPLEEKQHEPKAVTRCGRRAEFRMNNMLKVGIGPPQVFESFANQCGGYEKIGFRKKDIYNQIIQQRHKPWIRDMYEKREMWTTAYMRGKFFAGFRTTSRCEVLRHLDIKELPKSVVLRRWTKGAKDMVNVSSGQSSAGWDSQKVFRVEDLNFLYRKLSVVNGDTVEDYYDTREKLLEEYEMKKAKKAQQSPADSEPVASANEGLRDPLRAREKGTSRASMSAGGLRVKRTTKCSWCRVAGHNRVTCPLRAQSQQMSQAEHQSSMFDEEEGNYYNVYIN 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi137g00081 524 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 313 347 IPR031052 GO:0006355
Sebi137g00081 524 MobiDBLite consensus disorder prediction 430 469 - -
Sebi137g00081 524 MobiDBLite consensus disorder prediction 102 122 - -
Sebi137g00081 524 Pfam FAR1 DNA-binding domain 203 270 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi137g00081 Sebi-Chr137 1568968 1572943 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi137g00081 FAR1 1.8e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi137g00081 - - tpra:123886262 133.65