Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi137g00075 ATGGTAAAAAAAAGTCTCACTCATCCTCTCTCATCTTTGTCAGTCTCCCTTCGCATCATTCCGGATTTTCTCCTCTATTTTGGGGAGAAATTGCAGGAAAACAAGACCTTGGGATTTGAAAAGCTTCATGAGATAGCAGTTGGGACAGCCAGAGGCATTGCTTACTTGCATGAAGAGTTTCAACAAAGAATAATCCACTATGACATTAAACCAGGAAATATTCTCTTGGACAGCAACTTGTGTCCTAAAGTTGCTGATTTTGGTTTGGCCAAGCTTTGCAACAGGGAAAATACTCATATAACTATGACTGGAGGCAGGGGAACTCCTGGTTATGCTGCACTTGAACTTTGGATGCCATTTCTTGTGGGGGAATTGATAATAACTTGTGGGATAGAGGAACAATATGAGGAGATAGCAGAGAGAATGGTTAAGGTAGCTCTGTCATGTGTTCATTATAAACCAAAATCAAGACCTGAGATGAGTGTTGTGGTGAAAATGCTGGAAGGTTCTGGCTCCAACCTTGAACGTGCTACTCCTATTATGAGGGAGTACGAGATTGAATTAGCTAGTACTGCATAA 579 0.4128 MVKKSLTHPLSSLSVSLRIIPDFLLYFGEKLQENKTLGFEKLHEIAVGTARGIAYLHEEFQQRIIHYDIKPGNILLDSNLCPKVADFGLAKLCNRENTHITMTGGRGTPGYAALELWMPFLVGELIITCGIEEQYEEIAERMVKVALSCVHYKPKSRPEMSVVVKMLEGSGSNLERATPIMREYEIELASTA 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi137g00075 192 Pfam Protein kinase domain 30 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi137g00075 192 PANTHER RUST RESISTANCE KINASE LR10-RELATED 132 175 IPR045874 GO:0004672
Sebi137g00075 192 SMART serkin_6 2 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi137g00075 192 SUPERFAMILY Protein kinase-like (PK-like) 32 181 IPR011009 -
Sebi137g00075 192 ProSiteProfiles Protein kinase domain profile. 1 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi137g00075 192 Gene3D Transferase(Phosphotransferase) domain 1 27 187 - -
Sebi137g00075 192 ProSitePatterns Serine/Threonine protein kinases active-site signature. 64 76 IPR008271 GO:0004672|GO:0006468
Sebi137g00075 192 FunFam Os07g0541700 protein 21 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi137g00075 Sebi-Chr137 1384503 1385531 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi137g00075 39 175 Receptor kinase-like Gene Family AT5G38280 36.702 1.44e-29 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Sebi137g00075 Pkinase 1.7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi137g00075 - - gmx:100803355 218.394