Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi137g00061 ATGGATCTTGAGACAAAGATTAGAGAAACCTATGCTTCACATCCAATGCATTTACAAGAAAGCTACTTGAAACCCAGCATCAAGGATGAGATTCCTTTTGGGGTTCCTTCATCTCAGGGATTCTTGCAAGATTTTCACCATATTGATCAGTTTCATCATGTGAATGGTTCCTCATCCAATCCTGTTTCTGGGGTTCAAACTCCAAATGCTGATCCTAGTGATAATTTAACCTTTGTATGTTCATCAACTGGTTTTGATGCTTATGAATTTAAGCCTTTTGTGGAGAATAGTGGTACTCATGTTATGGACAATTTCCTTTATGGAGGTTATAGCAACCTCCCTCAGAGGAATCAAATGGATGTGATGGTTACAAACCAAAGCTATTTTCCCTTTAATCCTAGAGAAACCAAGCCTATGAATTTTGTTGTACCAGATGAAGTCTCATGCATAACACCAGTGAATCATTCCAAAAGAGTTGGCATGAACAAAAACAATAGGACATATACAACCACTAGAAGGACACACAAAGTTCGTAAGAAGTCCAACATAGTCAAGGGACAATGGACAGTAGAAGAAGATGGGTTGCTGATTCAACTGGTAGAACAATATGGATTGAGGAAGTGGTCTCATATTGCTCAGATATTGCCAGGAAGAATAGGAAAACAGTGCAGAGAGCGATGGCATAACCATCTAAGGCCTGACATTAAGAAGGACATATGGACTGATGAAGAGGATAAGATACTGATTGAAGCTCATGCAGAGATAGGAAACAAATGGGCAGAGATTGCTAAAAGATTGCCAGGAAGAACTGAGAACTCAATAAAAAATCATTGGAATGCAACTAAGAGAAGGCAATATTCCAAAAGAAAGTGCCGCTCCAAATACCCAAGAGGCACACTTCTACAGGAATATATCAAGAGCTTGAACTTAGACAAAAACCCTCCAATAGACTATAGGAGAAAATCTTCTGCTAATGCTAACAATGCCATGAAAAACAAAGCTACCACAAGCAAATTAGCAGTACCAATAGCTCAGCCACAGATTGGTGATCAATTTTGTCCCAGTGATTGCTTTGTGCCAAATTGTGATTTTAATGGGGTCTCTGACTTTTGCTTTGGTGAGAATTTGTTTGAAGAAGGATGTAGTATTGATTCTCTGCTAGATGATATGCCTTGTGGTCCTACTACTATGAATGAGAAAGGTTTTGAAGGAAAAATGCACTGTGCTCCTGTTGTTAATCTTGATGACAATCATGTTGAGACAGAGATGCCACTTGGGATTATAGCATCCATGCTGGGGGTTGAAGTTAAGAAGGAGCTGGATTTGGTGGAGATGGTCAATGGAATAGTTAAATAA 1356 0.3909 MDLETKIRETYASHPMHLQESYLKPSIKDEIPFGVPSSQGFLQDFHHIDQFHHVNGSSSNPVSGVQTPNADPSDNLTFVCSSTGFDAYEFKPFVENSGTHVMDNFLYGGYSNLPQRNQMDVMVTNQSYFPFNPRETKPMNFVVPDEVSCITPVNHSKRVGMNKNNRTYTTTRRTHKVRKKSNIVKGQWTVEEDGLLIQLVEQYGLRKWSHIAQILPGRIGKQCRERWHNHLRPDIKKDIWTDEEDKILIEAHAEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKCRSKYPRGTLLQEYIKSLNLDKNPPIDYRRKSSANANNAMKNKATTSKLAVPIAQPQIGDQFCPSDCFVPNCDFNGVSDFCFGENLFEEGCSIDSLLDDMPCGPTTMNEKGFEGKMHCAPVVNLDDNHVETEMPLGIIASMLGVEVKKELDLVEMVNGIVK 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi137g00061 451 Pfam Myb-like DNA-binding domain 185 231 IPR001005 -
Sebi137g00061 451 Pfam Myb-like DNA-binding domain 240 279 IPR001005 -
Sebi137g00061 451 SUPERFAMILY Homeodomain-like 182 278 IPR009057 -
Sebi137g00061 451 CDD SANT 240 282 IPR001005 -
Sebi137g00061 451 ProSiteProfiles Myb-like domain profile. 180 231 IPR001005 -
Sebi137g00061 451 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 180 235 IPR017930 -
Sebi137g00061 451 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 236 286 IPR017930 -
Sebi137g00061 451 SMART sant 184 233 IPR001005 -
Sebi137g00061 451 SMART sant 236 284 IPR001005 -
Sebi137g00061 451 CDD SANT 188 231 IPR001005 -
Sebi137g00061 451 FunFam Transcription factor MYB119 238 302 - -
Sebi137g00061 451 Gene3D - 239 299 - -
Sebi137g00061 451 ProSiteProfiles Myb-like domain profile. 232 282 IPR001005 -
Sebi137g00061 451 FunFam Transcriptional activator Myb isoform A 184 237 - -
Sebi137g00061 451 Gene3D - 184 237 - -
Sebi137g00061 451 PANTHER MYB PROTEIN-RELATED 163 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi137g00061 Sebi-Chr137 966075 968028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi137g00061 85 391 MYB Transcription Factor Family AT4G18770 53.125 1.87e-101 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi137g00061 Myb_DNA-binding 2.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi137g00061 K09422 - gmx:102662267 624.78