Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi137g00054 ATGGTGGAAGGTAATGCTAATGATTCATCCGACAAGAATATACCAGAGGCTTCAAATGTTGGTGAAGAATTAAATATCGAACCTCATGTTGGAATGGAATTTGAGTCTATTAAAAAGGCGAGGGAGTTTTATATATCTTTTGCTAAAAAAAGGGGTTTTGGAGTACGTATTCGTTCAACTAAACCAAAGAGAGCAGTTTTGATATGTTGCAATGAAGGTCAACACCAAGTGAAAAGCGCTGGATATGAAGAAATTCAAGATAGCGTCAGTCAAACTAAAAGAAAATGTTCAACCACCCGAAGTGGTTGTCAAGCTTCACTTATTGTTTCAAGAGGCACAACACAAAGTAGTTGGTTTATACAATCTTTTAACAATGATCATAACCATGTCATGGTTAGCCCCAGGAGCGTGTCTTATATGAGGTGTCATAAAAAGATGACCATTGCTGCAAAAAATCTTGTTGAAAGATTTGAGGAAGAAGGCTTGCCGACAGGAAAGATTCCCAGTCATTTCATTTTGCAACGTTGGACTAAGGATGCTAACAAAGGTATCAAGGTCAATTATACTGAAGATAATCTTGATGGTCAATCTAATACATCAAGGATTATAAGAAGGATGCATGCACAACAAGAAGCAAGCATGTTAGTTGATCTTGCTGAGGAGTCTGAGGAGTTGTACAAGTTCATTATCTCAGAACTGAGTCACACTTGTAAGTTAGCTATAGCAATGAAAACAAATTCACTCATTGGTGATGAGATAACTCTTTTGGATTCAAGCCAAAATTTGAACAATACTTGCATATCTGAGCAAGGGAATGAACCCACACAATTGCCTATTGGTCATGCCCAATAA 852 0.3732 MVEGNANDSSDKNIPEASNVGEELNIEPHVGMEFESIKKAREFYISFAKKRGFGVRIRSTKPKRAVLICCNEGQHQVKSAGYEEIQDSVSQTKRKCSTTRSGCQASLIVSRGTTQSSWFIQSFNNDHNHVMVSPRSVSYMRCHKKMTIAAKNLVERFEEEGLPTGKIPSHFILQRWTKDANKGIKVNYTEDNLDGQSNTSRIIRRMHAQQEASMLVDLAEESEELYKFIISELSHTCKLAIAMKTNSLIGDEITLLDSSQNLNNTCISEQGNEPTQLPIGHAQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi137g00054 283 MobiDBLite consensus disorder prediction 1 21 - -
Sebi137g00054 283 Pfam FAR1 DNA-binding domain 42 132 IPR004330 -
Sebi137g00054 283 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 7 177 - -
Sebi137g00054 283 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi137g00054 Sebi-Chr137 872309 874370 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi137g00054 FAR1 4.5e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi137g00054 - - tpra:123886791 219.55