Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi137g00009 ATGATGCACAGCGAGCTAAATCGATTTGCAGTTTCCTCTCACTTCCTGAGCCCTTTCCCCAAATCATTCTCTCTAAGAAAGAAAGTCCCATGGTGGTACCAAATCCTCGATCCAAGGTCCAAATTCATCGCTCGATGGAACCGCACCTTCCTATACTCATGCATCGCCGCTCTCTTCCTTGATCCTCTCTACTTCTATTTCCCCATCACCGGCGACAAAGCCTGCATGCAAACCGACTTAGTCCTCGGCGTCTTCGTCACCTTCTTCCGCACCGTCGCCGACCTCTTCTTCCTCTTCCACATGGTCCTCAAGTTCCGCACCGCCTTTGTTTCTCCCACTTCCCGCGTTTACGGCCGCAAAGAACTCGTCACCGATCCCCGCCAAATCGCCTCTCGCTACCTCAAATCTGATTTCATCGTCGATCTCCTCGCCACACTTCCCCTGCCTCAGATTGTCATTTGGTTCGTCGTTCCCGCCGTCAAAAATTCAACCGCCGCTCATGCCAACCACACTCTCTCCCTAATCGTTCTCATTCAATACATCCCTAGGCTGTTTCAGATTTTCCCCTTGCAACGCCGAATCTTGAAAACTAGCGGACTCATAGCCAAAACTGCATTAGCAGGGGCATTGTACAATCTTGGTTTCTACATGTTGGCCAGCCACGTTCTAGGAGCTTCTTGGTATGTGTCGTCGATTCAGAGGCAATATGAGTGTTGGAGAATAACTTGCAAGAAGGAGATGAATAGAACGCACACTCTCCTTCTTGTAATCCTTCGTTTTTGGATTGTGCTACCCTCAACAACCACGAACGCCAAGCTTGGTTTAAACGCACAAGAGTTCTTGCTAATTGTGATGCTCTCAATAGTAAAAACCACTTTCAGTTTGGATTGTTCGCTGATGCTTTTACTGATCACTTCATATGGACAAAATCTTCAGACCAGTACTTACAGTGGTGAAACATTATTTCAAGTTTCATTTGCATTGCAGGCCTTATCTTGTTTGCGCATCTCATTGAATTATCTGCAATCTTCAACTGCAAGACTTGAAGAGTGGAGACTCAAACAAAAAGATACAGAAGAATGGATGAATCACCGTCAACTTCCACCAGAATTGCAAGAACGTGTTCGCAGGTTTGTTCAATATAAATGGCTTACCACTAGAGGTGTTGATGAAGAAGCCATTTTACGCGCTTTGCCCCTGGATCTTCGCCGACAGATTCAGAGGCATCTCTGTCTTGATATTGTTCGTCGGATCAGGATCTTCAACTCTATCACCCTCAGACCTGGTGATTTTTGTGGAGAAGAATTGCTAACATGGGCTTTGATGCCTACTTCTAGTCTTAACCTTCCATCTTCCACTAGAACAGTGAAGACCCTCACTGAAGTTGAAGCATTTGCACTTAGAGCTGAGGATCTCAAATTTGTATCCAACCAGTTTAAGCGCCTTCACAGCAAGAAACTCCAACATGCTTTTAGGTACTATTCCCATCAATGGAGGGCTTGGGGGGCTTGCTTTATACAAGCTGCTTGGAGACGTCACCGCAAGAGAAAATTGGCAATGGAGTTGTTAGAGAAAGAGAATTTGTACTATTCAAATGTGATGGAGCTAGAAGATGATGAAGAAATAAGTGCTGCAGAGAGTTCAACGGGGGACAGTGCAAGCCATATACAGAATCTTGGGGCTACAGTTTTGGCTTCTAAATTTGCCGCAAACACTAGAAAAGGGGCAGTTAAAAAAGTAACAATCCCTGATGCTAGCAGTTTAAAGATGCCCAAGATGTTCAAGCCAACGGAGCCTGATTTCTCAACATTCCATGAAGATTAG 1824 0.4539 MMHSELNRFAVSSHFLSPFPKSFSLRKKVPWWYQILDPRSKFIARWNRTFLYSCIAALFLDPLYFYFPITGDKACMQTDLVLGVFVTFFRTVADLFFLFHMVLKFRTAFVSPTSRVYGRKELVTDPRQIASRYLKSDFIVDLLATLPLPQIVIWFVVPAVKNSTAAHANHTLSLIVLIQYIPRLFQIFPLQRRILKTSGLIAKTALAGALYNLGFYMLASHVLGASWYVSSIQRQYECWRITCKKEMNRTHTLLLVILRFWIVLPSTTTNAKLGLNAQEFLLIVMLSIVKTTFSLDCSLMLLLITSYGQNLQTSTYSGETLFQVSFALQALSCLRISLNYLQSSTARLEEWRLKQKDTEEWMNHRQLPPELQERVRRFVQYKWLTTRGVDEEAILRALPLDLRRQIQRHLCLDIVRRIRIFNSITLRPGDFCGEELLTWALMPTSSLNLPSSTRTVKTLTEVEAFALRAEDLKFVSNQFKRLHSKKLQHAFRYYSHQWRAWGACFIQAAWRRHRKRKLAMELLEKENLYYSNVMELEDDEEISAAESSTGDSASHIQNLGATVLASKFAANTRKGAVKKVTIPDASSLKMPKMFKPTEPDFSTFHED 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi137g00009 607 FunFam Cyclic nucleotide-gated ion channel 1 347 411 - -
Sebi137g00009 607 Pfam Ion transport protein 46 240 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Sebi137g00009 607 Gene3D Jelly Rolls 411 481 IPR014710 -
Sebi137g00009 607 Gene3D Helix hairpin bin 346 410 - -
Sebi137g00009 607 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 28 423 - -
Sebi137g00009 607 SUPERFAMILY Voltage-gated potassium channels 37 233 - -
Sebi137g00009 607 SUPERFAMILY cAMP-binding domain-like 349 488 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi137g00009 Sebi-Chr137 186065 188755 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi137g00009 29 607 Ion Channels AT5G14870 51.339 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi137g00009 K05391 - gmx:100783672 899.812