Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi136g00074 ATGGACAGTATTCTGGGTCTTCTCAAACTTCGTATTAAAAGAGGTATTAACCTCGCAATTCGCGATTCTCGTTCCAGCGACCCTTATGTTGTTGTCAACATGGGAGAACAGAAGCTGAAGACTCGTGTGGTAAAAAATAACTGCAATCCTGAGTGGAATGAAGAACTGACCCTTTCAATAAAGGATGTTAATGTCAAATCTCCAATACATCTGACAGTTTATGACAAAGACACATTTTCTGTGGATGACAAAATGGGTGAAGCAGAGATAGAGTTGAAAGAATATTTTGAATGTTTTAAGATGGGTTTGGAGAAGCTCCCAAATGGATGTGCAGTGAAGAGGATTCAACCAAGTAGGACTAACTGCCTTGCTGAAGAGAGCAGCTGCATTTGGCAAAATGGGAATATCATCCAAGAAATGATTCTAAGATTGAAAAATGTTGAGAGAGGGGAACTAGTTGTGGAAATTCAGTGGGTTGATATTCCAGGTTGCAAGGGCTTATCAGAGGTGCAATTCTGA 519 0.4008 MDSILGLLKLRIKRGINLAIRDSRSSDPYVVVNMGEQKLKTRVVKNNCNPEWNEELTLSIKDVNVKSPIHLTVYDKDTFSVDDKMGEAEIELKEYFECFKMGLEKLPNGCAVKRIQPSRTNCLAEESSCIWQNGNIIQEMILRLKNVERGELVVEIQWVDIPGCKGLSEVQF 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi136g00074 172 CDD C2_ArfGAP 5 150 - -
Sebi136g00074 172 Gene3D C2 domain 4 162 IPR035892 -
Sebi136g00074 172 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 4 165 IPR044562 -
Sebi136g00074 172 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 159 IPR035892 -
Sebi136g00074 172 Pfam C2 domain 7 94 IPR000008 -
Sebi136g00074 172 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Sebi136g00074 172 SMART C2_3c 7 104 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi136g00074 Sebi-Chr136 1272547 1273599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi136g00074 38 168 C2H2 Transcription Factor Family AT1G70790 67.669 1.78e-60 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi136g00074 - - gmx:100788395 292.737