Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi136g00068 ATGGTACTAGAGCCTCTTTCATCCAATAAGAAATTTCTAAATACTTGGGATTGTTCTGCCTGGGTTCGTACTTATGCATTATTTTTGGAGGAAAGACTTGAATGTTTCCAGATTCTGAAGTATGATGTTGAAGCTGAGCGTCTACCCAAGTCCGCCCCAGGGCAGGACAAGGGGTACAGCAGAACCAGGGATTTGGATGGTGAGAAGCTATTGGAGCAGTTGCCTGCTTTGCAGCAGCTGCTCTATCGTCTTGTTGGTTGTCGGCCAGAAGGAGCTGCTGTTAGCAACTATGTGATACAATATGCCCTGGCTCTGGTTCTAAAAGAGAGCTTTAAGATTTATTGTGCTATTAATGATGGCATCATCAATCTTGTTGATAAGTTTTTTGAGATGCCCAGACATGAAGCTATCAAAGCCCTTGAAATCTATAAACGTGCGGGTCAGCAGGCAGCAAGTCTCTCTGATTTCTATGAAATTTGCAGAGGATTGGAACTTGCTAGGAATTTTCAGTTTCCTGTTTTAAGAGAGCCTCCACAATCTTTTCTTATTACCATGGAAGACTACATAAAGGAGGCACCACGAGTGGTTTCAGTTCCAAGTGAGCCATTGTTGCTGTTGACATACAGACCAGAAGATGCTCCTACAATTGAAGATGTTAAATTATCTGTAGAACAGGAGCCATCAGTGCCTGTGAATGATGTTGTAATCTCAAATTCTGAGCCTGCTCCTGCTCCTCCTCCACCACATCACAAGAATTTTGAAACTGGAGACTTACTGGGTTTGAATGACAATACACCTGATGCATCATCAATAGAAGAAAGAAACGCGCTTGCCCTAGCCATAGTCCCCTCTGAAATTGGCACTACATCAGCTTTTGACTCAAGCGCTGCCCAAGCAAAATATTTTGATCCAACCGGATGGGAGCTTGCACTGGTCTCCACTCCAAGTACCAATATTTCTTCAGTCAATGAGAGGCAATTGGCTGGTGGATTGGATTCTCTCACCCTGAATAGCTTATACAATGAAGGAGCATATAGGTCTGCCCAGCAACCAGTATATGGAGTACCAGCCCCAAATCCATTGAAGTGCAAGATCCCTTTGCTTTATCAAGCAGCATCCCTCCTCCACCCAATGTACAAATGGCAGCAATGGCTCAACAACAGCAATCTTTGGATGAATAAAAGAAAATCGAGGTGGACAAGACTTTCTGTTGAGGAACAGAAGACCTTTTCTTACGAAACATTGGTTGCTGCTACAAAGAACTTTCACGTTCTTAACAAGCTTGGTGAAGGAGGCTTTGGACCCGTCTACAAGGGGAAGTTGAATGATGAGAGAGATATAGCAGTGAAGGAAGTTATCACAAAGGTCATCTCAAGGAAGACACAGTTCATAAACGAGGCAAAGTTGTTGACTCGTGTGCAGCATCGTAATGTGGCATACAAGCTTTACAAGAAAGGGAGGGCGTTAGAAATGGTGGACCCCACAATAGCATCTTCTGTGATAACAGAACAAGTTGAAATGTGCATTAAATTAGGTCTATTGTGCACTCAAGCTGAACTTCAGCTGCGTCCAACAATGGGGCGTGTGGTGGTGACAAAGATCCACTGGAAGATGGTCAAGGAAGCTTGA 1629 0.4377 MVLEPLSSNKKFLNTWDCSAWVRTYALFLEERLECFQILKYDVEAERLPKSAPGQDKGYSRTRDLDGEKLLEQLPALQQLLYRLVGCRPEGAAVSNYVIQYALALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIKALEIYKRAGQQAASLSDFYEICRGLELARNFQFPVLREPPQSFLITMEDYIKEAPRVVSVPSEPLLLLTYRPEDAPTIEDVKLSVEQEPSVPVNDVVISNSEPAPAPPPPHHKNFETGDLLGLNDNTPDASSIEERNALALAIVPSEIGTTSAFDSSAAQAKYFDPTGWELALVSTPSTNISSVNERQLAGGLDSLTLNSLYNEGAYRSAQQPVYGVPAPNPLKCKIPLLYQAASLLHPMYKWQQWLNNSNLWMNKRKSRWTRLSVEEQKTFSYETLVAATKNFHVLNKLGEGGFGPVYKGKLNDERDIAVKEVITKVISRKTQFINEAKLLTRVQHRNVAYKLYKKGRALEMVDPTIASSVITEQVEMCIKLGLLCTQAELQLRPTMGRVVVTKIHWKMVKEA 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi136g00068 542 Gene3D ANTH domain 55 200 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Sebi136g00068 542 Gene3D - 4 43 IPR008942 -
Sebi136g00068 542 Pfam ANTH domain 12 191 IPR011417 GO:0005543
Sebi136g00068 542 SUPERFAMILY GAT-like domain 60 191 - -
Sebi136g00068 542 SUPERFAMILY ENTH/VHS domain 2 44 IPR008942 -
Sebi136g00068 542 Pfam Protein kinase domain 422 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi136g00068 542 SUPERFAMILY Protein kinase-like (PK-like) 407 479 IPR011009 -
Sebi136g00068 542 PANTHER CLATHRIN ASSEMBLY PROTEIN 14 360 IPR045192 GO:0048268|GO:0072583
Sebi136g00068 542 FunFam Putative clathrin assembly protein 55 203 - -
Sebi136g00068 542 ProSiteProfiles Protein kinase domain profile. 422 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi136g00068 542 ProSiteProfiles ENTH domain profile. 1 43 IPR013809 -
Sebi136g00068 542 Gene3D Phosphorylase Kinase; domain 1 392 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi136g00068 Sebi-Chr136 1123768 1151480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi136g00068 402 478 Receptor kinase-like Gene Family AT4G23190 46.753 3.91e-15 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi136g00068 ANTH 9.5e-57 CL0009
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi136g00068 - - gmx:100776929 571.237