Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi136g00058 ATGGAGAGAGATTTCTTGGGTCTACGCTCAAAATCAAACGAATCATTGTCTGTGCCGAAGGAAGAGATCAACAATGATGGCTGCTTCATAAAAGGTTCAGTGGTAAAATGGCCCTTCTCAAATGAAGTCTCTGCTCATCCCCAATTGATGTCTTTCAATGTTTCAGAAGATGACAAGGCTAAAATGAGGGTGTCTGATTCCATCACATCTGCTGGATTTTTGGCCATCCCAAAAGATGCATTTGACTCTACTCAGAAACGTGCTGGGGCTGAACTACAGAAATCTTTCAATCATGATGGACATGGTGGCATTCATTTTTCCCTGACTCCGTATCCTGTACAACATGATGTGAATTCTGTGAATCATCCTCATGATGTGAAGATGTTTTCAGTTTCCATGGGACATCCATTCCTAAAGAACCATTTTGTAACTGTTGGTCAGAACATGAATGGTGCTAATGTGAAGCAACCACTACTTGGGGGAATACCTGCTACAGCTCCTCATTCAGTTCTTCCTATCACTGGGGCTGTTGCTGGAATGACTAAATCATGTGTGAAACCATCTGCACCTGCTCCTAAACTTACCATATTCTATGCGGGTACTGTGAATGTCTTTGATGATATCTCCCCTGAGAAGGCACAAGCTATCATGTTGTTGGCTGGGAATGGCTTATCTGCAGCCTCTAACATGGCACAGCCTAAAGTTCAGGCACCCAGCTCAAACTTGGCAGCAGGTGATGGTGTACCTGTGAGTCAACCTATAAATATACCATCATGCTCTGGTCTTCCAAGTCCTTTATCTGTTTCTTCACACACTGGTGCACAGTCAGGGAGTGGCTCAAGTAGCAATGATGAATTTCTGGCAAGTAAAACATCTGGAGGTCCCACCACTTCTGTTAGTAAAGTGGAGACTCCAAAAGTAGTCAATGCAACAACCATGTTTCCATCAGCTGTACCACAGGCTCGCAAAGCATCATTGGCTCGATTTTTGGAGAAGCGTAAGGAAAGGGTGATGAATGTAGCACCATATAACCACAACAAGAAGTCTGAGAATGTACCACTGCAGGACACAATGGTTGATAACATCTCTGCAACTACTGGTACTAATACTCCTTCAACCAAGCAAGGATAG 1131 0.4368 MERDFLGLRSKSNESLSVPKEEINNDGCFIKGSVVKWPFSNEVSAHPQLMSFNVSEDDKAKMRVSDSITSAGFLAIPKDAFDSTQKRAGAELQKSFNHDGHGGIHFSLTPYPVQHDVNSVNHPHDVKMFSVSMGHPFLKNHFVTVGQNMNGANVKQPLLGGIPATAPHSVLPITGAVAGMTKSCVKPSAPAPKLTIFYAGTVNVFDDISPEKAQAIMLLAGNGLSAASNMAQPKVQAPSSNLAAGDGVPVSQPINIPSCSGLPSPLSVSSHTGAQSGSGSSSNDEFLASKTSGGPTTSVSKVETPKVVNATTMFPSAVPQARKASLARFLEKRKERVMNVAPYNHNKKSENVPLQDTMVDNISATTGTNTPSTKQG 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi136g00058 376 ProSiteProfiles Tify domain profile. 187 222 IPR010399 -
Sebi136g00058 376 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 132 348 IPR040390 -
Sebi136g00058 376 SMART tify_2 187 222 IPR010399 -
Sebi136g00058 376 Pfam tify domain 191 221 IPR010399 -
Sebi136g00058 376 MobiDBLite consensus disorder prediction 261 303 - -
Sebi136g00058 376 Pfam Jas motif 319 343 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi136g00058 Sebi-Chr136 980923 984093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi136g00058 35 349 Tify Gene Family AT3G17860 35.928 2.01e-36 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Sebi136g00058 tify 4.4e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi136g00058 K13464 - gmx:100807043 454.521