Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi136g00057 ATGTTTGGTGGTCAACTTCCAGAAGAAATGTGCCAGCAGGCTCACTCACTTCAACAGATTTCTATATTAAACAACAAAGTTGGAGGAACCATTCCAAGGTCCATTAGCAACTGCACTTCATTGAAGCGCTTATTCTTAGGAGTAAACTTTTTTACAGGTACCATACCTCATGAGATTGGTGACTACTTAAAAAACCTTGAGCAATTGCATTTGCAAGGTAATAGACTAAGAGGGTCTATTCCTTCAAACATCTTCAACATCTCAGGGTTGAAAAGCTTGTCACTATCAAATAACCAACTCTCAGGCAATCTTCCAATTTATGCACATCATAACCTTTCAAGCCTCCAATTCTTGTACCTTTCAGCCAATAATCTTAGTGGAGAAATTCCAAGTAGCCTTTTCAATGCTTCAATGCTTCTTGAATTGGTCCTTGCCAACAATACATTCACAGGAGTTATACCTGACTCAATTGGGAATTTGAGAAACCTTCAGCTTCTTTATCTGATTGGTAACAAGTTGACTAGTGATCCATCTTCTCCAGAGATTAGTTTCCTCACTTCATTGACAAAGTGTAGACAATTGGAGAAAATTCTGATATCAATGAATCCTCTTAATGGAACACTTCCAAATTCTATTGGAAATCTCTCCAACTCTCTTCAAACATTTAATGCTTGGAGTTGTGATGTCAAGGGTGAAATTCCTTCACAAATTGGGAATTTAAAGAGCTTGTATGACATAAACCTGAATGATAATCAACTTATTGGACAGGTTCCTAGTACAATTGCAACTTTGCCTCTTCTCCAACGTTTGGATCTTTCAAAGAACAGACTAAATGGCTCAATCCCAAGTCAGATTTGTCAATTAAAAAATTTGAATGAGTTTAGGCTTAGCAAAAATCAGATTTCTGGTTCAGTGCCAAGATGCATAGGGAATCTTACTTCTCTAAGAAATCTTTATTTGGATTCTAATAACCTCAACTCTTCAATACCTTCTTCCTTTTGGAGCCTCACTGATATCTTGGAGGTGAACTTATCCTCTAATGGTTTTGGTGGGTCTTTGCCAAATGAGATAAGTGGCATGAATGCAGTGATAAAATTGGACATATCAAAGAATCACCTTTCAGGAGAACTTCCAAATGGGATTGGATCCTTGCAAAAGATAATGAACCTTTCATTAGCAAATAATATGTTACAAGGGCCTATTCCTGATTCAGTTGGAAATATGCTAAGCTTGGAAGTTTTGGACCTTTCTCATAATCTTTTATCAGGAACCATCCCAAAGTCAATTGAGAAACTTTTTTATCTCAAATTTATCAACTTGTCTTATAATAAACTACAAGGAGAAATCCCTTCTGGTGGAAATTTTGCAAACTTCACAGCTCAATCATTCATGATGAATGATGCACTTTGTGGAAGACCTGAGCTAGGAGTCCAATCATGTCCCATTAATGGTACAAAACAGAGAAAAACAGGGAAAAAGCTTCTATTGAAATTGATCATACCCTTGATTATTGTGTCTTGCATCTTTGTTGGATGTGCAATTCTTCTAATATACAAGAGAAAATACAATAAATCAAGTTCAATTGATGATATAAACTTACCAACATTGCAATTTCCAAGTAGAATTTCCTACCATGAACTTGTTGAGGCAACAAAAAATTTTGATGAGCATAATCTTCTTGGTAGAGGGAGTTTTGGTTCTGTGTACAAAGGTGAGCTTTCTTCAAATGCAATGGTGATTGCAGTTAAAGTATTCAATTTGGAAGTGCAAGAAGGGTCAAGGAGTTTTGATATGGAATGTGAAGCAATGCGCAATCTTCGCCATCGCAATCTAGTTAAAGTCATTACTAGTTGTTCTAATGCTGTTGATTTCAAAGCCATAGTAATGGAATTTGTGTCAAATGGGAACTTAGAGAAGTGGTTGTATTCTCATAACTATTTCCTGAGTTTTTTACAACGGTTGAATATAGCAATAGATATTGCATCTGCCTTGGAGTATCTCCATCATGGTAACTCAAAACCTGTGGTACACTGTGACTTGAAGCCAAGTAATGTTTTGTTGGATGAAAATATGGTAGCTCATGTTTGTGATTTTGGCATATCTAAACTCTTGGAAGAAGAGCAATCTCAAATTCATACCAACACTTTGGCAACTCTTGGTTATATTGCACCAGAATATGGATCCAAAGGTGTTGTGTCCATAAAAGGAGATGTATACAGCTATGGTATTATGCTTATGGAAGTATTTACAAGAAAGAAGCCAACTGATGAAATGTTTGTAGAGGGATTAAGTTTAAGGTCATGGATCCAAGATTCAATGCCACATGAGATCATTCAAGTTATAGACCATAATCTATTGGACGGAGAGGAACAATTGATTTATGCTATGGAAGCAGCTTTGTCAAATATCATGATGTTGGCTTTAAATTGCTCTGCTGACACCCCTGATGAGAGAATGAGTATGGAGGAAGTCTTAAGTCGCTTAAACAAAATCAAAATTATATTTTTACAAATGATAGAAGGAAATTTAAGTTAA 2535 0.3602 MFGGQLPEEMCQQAHSLQQISILNNKVGGTIPRSISNCTSLKRLFLGVNFFTGTIPHEIGDYLKNLEQLHLQGNRLRGSIPSNIFNISGLKSLSLSNNQLSGNLPIYAHHNLSSLQFLYLSANNLSGEIPSSLFNASMLLELVLANNTFTGVIPDSIGNLRNLQLLYLIGNKLTSDPSSPEISFLTSLTKCRQLEKILISMNPLNGTLPNSIGNLSNSLQTFNAWSCDVKGEIPSQIGNLKSLYDINLNDNQLIGQVPSTIATLPLLQRLDLSKNRLNGSIPSQICQLKNLNEFRLSKNQISGSVPRCIGNLTSLRNLYLDSNNLNSSIPSSFWSLTDILEVNLSSNGFGGSLPNEISGMNAVIKLDISKNHLSGELPNGIGSLQKIMNLSLANNMLQGPIPDSVGNMLSLEVLDLSHNLLSGTIPKSIEKLFYLKFINLSYNKLQGEIPSGGNFANFTAQSFMMNDALCGRPELGVQSCPINGTKQRKTGKKLLLKLIIPLIIVSCIFVGCAILLIYKRKYNKSSSIDDINLPTLQFPSRISYHELVEATKNFDEHNLLGRGSFGSVYKGELSSNAMVIAVKVFNLEVQEGSRSFDMECEAMRNLRHRNLVKVITSCSNAVDFKAIVMEFVSNGNLEKWLYSHNYFLSFLQRLNIAIDIASALEYLHHGNSKPVVHCDLKPSNVLLDENMVAHVCDFGISKLLEEEQSQIHTNTLATLGYIAPEYGSKGVVSIKGDVYSYGIMLMEVFTRKKPTDEMFVEGLSLRSWIQDSMPHEIIQVIDHNLLDGEEQLIYAMEAALSNIMMLALNCSADTPDERMSMEEVLSRLNKIKIIFLQMIEGNLS 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi136g00057 844 SUPERFAMILY Protein kinase-like (PK-like) 534 834 IPR011009 -
Sebi136g00057 844 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 632 840 - -
Sebi136g00057 844 SUPERFAMILY L domain-like 6 153 - -
Sebi136g00057 844 Pfam Leucine rich repeat 386 445 IPR001611 GO:0005515
Sebi136g00057 844 Pfam Leucine rich repeat 65 125 IPR001611 GO:0005515
Sebi136g00057 844 SMART LRR_typ_2 408 432 IPR003591 -
Sebi136g00057 844 SMART LRR_typ_2 312 336 IPR003591 -
Sebi136g00057 844 SMART LRR_typ_2 63 87 IPR003591 -
Sebi136g00057 844 SMART LRR_typ_2 264 288 IPR003591 -
Sebi136g00057 844 SMART LRR_typ_2 160 185 IPR003591 -
Sebi136g00057 844 SMART LRR_typ_2 112 136 IPR003591 -
Sebi136g00057 844 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 1 188 - -
Sebi136g00057 844 PANTHER OS04G0122200 PROTEIN 63 836 - -
Sebi136g00057 844 SMART serkin_6 554 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi136g00057 844 Pfam Protein tyrosine and serine/threonine kinase 558 828 IPR001245 GO:0004672|GO:0006468
Sebi136g00057 844 PRINTS Leucine-rich repeat signature 267 280 - -
Sebi136g00057 844 PRINTS Leucine-rich repeat signature 408 421 - -
Sebi136g00057 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 675 687 IPR008271 GO:0004672|GO:0006468
Sebi136g00057 844 Gene3D Ribonuclease Inhibitor 1 179 IPR032675 -
Sebi136g00057 844 FunFam Serine-threonine protein kinase plant-type 535 631 - -
Sebi136g00057 844 Gene3D Ribonuclease Inhibitor 180 489 IPR032675 -
Sebi136g00057 844 SUPERFAMILY RNI-like 111 451 - -
Sebi136g00057 844 Gene3D Transferase(Phosphotransferase) domain 1 632 837 - -
Sebi136g00057 844 ProSiteProfiles Protein kinase domain profile. 554 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi136g00057 844 Gene3D Phosphorylase Kinase; domain 1 540 631 - -
Sebi136g00057 844 ProSitePatterns Protein kinases ATP-binding region signature. 560 583 IPR017441 GO:0005524
Sebi136g00057 844 FunFam Inactive leucine-rich repeat receptor-like protein kinase 189 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi136g00057 Sebi-Chr136 964156 967985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi136g00057 1 837 Receptor kinase-like Gene Family AT3G47570 36.334 1.41e-173 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sebi136g00057 PK_Tyr_Ser-Thr 7.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi136g00057 - K13420 lja:Lj0g3v0291039.1 1061.6