Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi136g00011 ATGACCATCAGATCAACAAGTTCGAAGCGGAAGCTTCACTTGGAACCAGTACCATCGCACATTATTAGCAAGAAGCTCCGGTCGAAGCTGCCTCGCCGGCGAAGAAGCCAGATCTCTCCGGTGCTTCTTATTTCGCCGATATTCAAAGTTTCCGGAGAGAATCGTCGTTTATCCGTCGTTTCAGTGGACTCGAGCTCTGGCTCTGACCTCGCCGGCGGTGAAGCTTCGTGTAATTCAAGCAGAGCTTCCACCGTATTCGCTCGCAAGGGAAGGTCGAACTCGAGGAACGAATTATCAGAAGAATTTGAAGGCGTTCGGAAGGCTGAGTGTGTGGATTTCTTGAGAAATCGGAGATTTCAGAAGCGGAGTGAAAATGAACCGGAGGTGTCACAGTCTTCGTGTGTGGACTCCAATACTGGCGTTCAAGAACGCAGCAGAAGCTTAATTTTGAAGTTCAGGAGCGGAAAAGAAAGTAAGAATCCGAAAGAAAATGACGAAGTTTCGGAAGCTTGCACGAAATCGGAGATTACATTCCCGGAGCAATTTTCCGTTGAGAATTCAAAGTCCGGACAAGGAAATTTGAAAATCTCGTCGGAGATAACTCGAAACGACGTCGTTGCAGTTAGCTCTGGTGTTCGCGACACGTCGTTTGGAGAGGAAAAGACCAAATGCAGGGAAAACAGAGCATCGGAATCCGATTTCTCTCAAGGTTCAAGGAACCACGGCAACTGCGCGGATTTGATAGCGCAATCGATGATAAATCAAGGTTCAGATAATTCCGGCGCCGATTCCGATCTCGCTTGCAGTGAGCAATTGCTATTCTTGCACTGCGACGACGAGGACGAATCAGAGTACTACTCCAGCCAGGGAACTGTGTTCTCTGACCTTCACTCCGAGATTTTCGGCGAATGCTCAGAGCTAGAGCTTTCAGATTATACTCCGTCTCTGTTTGTTGATTCTGGAAGCCAGTTTTCGCAAGGATCAGTTGCAGAAAATCCTTCGCCAACTTACGTACAGTTCCTTCAGTACCGCAAGGAATTCTCGACGCTAGCTTGTCCAGTTAATGCTTCAACCATCGAAGAAGATGTTTCTCTTCATTTCAAATTTGTGAGGTTCGAAGATTTGGATGACGAAGACAGCTACCAGATGCTAAGGAAGAGGGAAAGGAGGCAAGTTTTCCTGTGGAATTATGCTGAACGGTATTTCTCTACCACGGATTTCGGCGAGCTCGTGCTTCAGCAACGCTCGCAAATGGTTCAGTGGATCGTTGAGCAATCTTGCCGTAAACAGCTTCGGCAAGAGACGTTGTTTCTTGGAATCAGCCTACTTGACCGTTTCCTGAGCAAAGGATACTTCAAAGCCAGACGAAACCTTCATATTGTTGGAATAGCCTGCCTCACGTTAGCCACAAGGATCGAAGAAAACCAGCCATATAACAGAGTGGGGCAAAAGTATTTCTACATAGGAAGCAGTGTGTACAGTAGATGCGAGGTGGTAGCTATGGAATGGATGGTGCAGGAGGTCTACCTAAAAGCTGCCAATGCTGATGCAGATGTTGAGAAGAGGGGCCAAGTACCTAGCAGTTCGGGCTCTGTCGGCTCATGA 1605 0.4766 MTIRSTSSKRKLHLEPVPSHIISKKLRSKLPRRRRSQISPVLLISPIFKVSGENRRLSVVSVDSSSGSDLAGGEASCNSSRASTVFARKGRSNSRNELSEEFEGVRKAECVDFLRNRRFQKRSENEPEVSQSSCVDSNTGVQERSRSLILKFRSGKESKNPKENDEVSEACTKSEITFPEQFSVENSKSGQGNLKISSEITRNDVVAVSSGVRDTSFGEEKTKCRENRASESDFSQGSRNHGNCADLIAQSMINQGSDNSGADSDLACSEQLLFLHCDDEDESEYYSSQGTVFSDLHSEIFGECSELELSDYTPSLFVDSGSQFSQGSVAENPSPTYVQFLQYRKEFSTLACPVNASTIEEDVSLHFKFVRFEDLDDEDSYQMLRKRERRQVFLWNYAERYFSTTDFGELVLQQRSQMVQWIVEQSCRKQLRQETLFLGISLLDRFLSKGYFKARRNLHIVGIACLTLATRIEENQPYNRVGQKYFYIGSSVYSRCEVVAMEWMVQEVYLKAANADADVEKRGQVPSSSGSVGS 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi136g00011 534 MobiDBLite consensus disorder prediction 126 140 - -
Sebi136g00011 534 MobiDBLite consensus disorder prediction 121 140 - -
Sebi136g00011 534 ProSitePatterns Cyclins signature. 415 446 IPR006671 -
Sebi136g00011 534 Pfam Cyclin, N-terminal domain 409 503 IPR006671 -
Sebi136g00011 534 Gene3D - 402 509 - -
Sebi136g00011 534 PANTHER CYCLINS 346 507 IPR039361 -
Sebi136g00011 534 SMART cyclin_7 420 507 IPR013763 -
Sebi136g00011 534 SUPERFAMILY Cyclin-like 374 506 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi136g00011 Sebi-Chr136 219641 224148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi136g00011 379 519 Core Cell Cycle Gene Families AT1G76310 29.747 2.04e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi136g00011 K21777 - gmx:100817658 571.237