Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi136g00010 ATGAATCCCTTAACAAATGAAAGGGAAGAAGATTGGCTTGGTGCCCTTCTGAGGATCAAGATTGGCAATTGTGAAGAACACCAAGACCTTAAGTTCAATGAGAAGAATGTGTTCTGTGTAGACTGTGCAGTTAGCTTTTGTAGGTACTGTAAGGAAGCTCATTCCCTCCATCACAGATTTCAGATATACAAATATTGCTATCATGATGTTGTTCGCCATTCTGATCTACACAAGTATTTTGACTGCTCAAATATTCAAACTTATATATCCAATAATGACAAGATTGTGCATCTCAAACCCCGGCCATCATCCAAAGATATCAAACTAGCAAAAAGATCTAAAGCTGCTAATAGAAGCCTGAGTCTCAAGCCAAAGAAACCAAAACATCAACACCTCCAAAATGGGGTGGTTCTTGTGAAGAATGTGGAAGACATTTACAAGATAACCGTAATAGATTCTGCTCCATCACATGCAAGATCTCAGTGGAGCCCCAAAACCAAGGAATTGAAGAAAATTCTGTAG 522 0.3889 MNPLTNEREEDWLGALLRIKIGNCEEHQDLKFNEKNVFCVDCAVSFCRYCKEAHSLHHRFQIYKYCYHDVVRHSDLHKYFDCSNIQTYISNNDKIVHLKPRPSSKDIKLAKRSKAANRSLSLKPKKPKHQHLQNGVVLVKNVEDIYKITVIDSAPSHARSQWSPKTKELKKIL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi136g00010 173 ProSiteProfiles Zinc finger B-box type profile. 19 63 IPR000315 GO:0008270
Sebi136g00010 173 Pfam PLATZ transcription factor 64 117 IPR006734 -
Sebi136g00010 173 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 7 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi136g00010 Sebi-Chr136 202562 203847 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Sebi136g00010 PLATZ 2.9e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi136g00010 - - gmx:100820425 182.185