Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi136g00005 ATGGAAAATGGTTCTTTAGCTCAGAACCTCTCATCCAATGCACTTGATTGGAGAGAGAGGTATAACATTGCTCTAGGAACGACAAGGGGTCTGGCCTACTTACATGAGGAATGCTTGGAGTGGGTTTTGCATTGTGATATAAAGCCCGAAAATATACTTCTTGGCTCTGATTATCAACTTAAGGTAGCGGATTTTGGATTGTCTAAGCTACAAATTGTTGACCCTGCTTTAGGATCAAATTGTGACATGAAAAAAATGGAGATATTGGCTACAGTGGCTTTGGAATGTGTATTGGAAGATAAAGATGAGAGACCCAGCATGAGCTAA 327 0.4037 MENGSLAQNLSSNALDWRERYNIALGTTRGLAYLHEECLEWVLHCDIKPENILLGSDYQLKVADFGLSKLQIVDPALGSNCDMKKMEILATVALECVLEDKDERPSMS 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi136g00005 108 Gene3D Transferase(Phosphotransferase) domain 1 1 76 - -
Sebi136g00005 108 SUPERFAMILY Protein kinase-like (PK-like) 1 75 IPR011009 -
Sebi136g00005 108 ProSiteProfiles Protein kinase domain profile. 1 108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi136g00005 108 FunFam Protein kinase superfamily protein 1 70 - -
Sebi136g00005 108 Pfam Protein kinase domain 1 71 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi136g00005 108 PANTHER OS07G0415500 PROTEIN 1 70 - -
Sebi136g00005 108 ProSitePatterns Serine/Threonine protein kinases active-site signature. 42 54 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi136g00005 Sebi-Chr136 117898 118224 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi136g00005 1 70 Receptor kinase-like Gene Family AT1G66910 54.795 2.25e-20 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Sebi136g00005 Pkinase 1.2e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi136g00005 - - aip:107625486 129.413