Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi135g00018 ATGGACTTGCAAGAAATGCGCATGAAACTAATCTATCATCTCAAGGACTGTGCCCTGTTCACTGAATCACGTGACTTCATCAATGCAGATAATAGATTGTACCATATTTCTCACCTTGCCTCCCCTCATGGTGATTCAATACAACGTGTAGCCACTTATTTCAATGAGGCACTTGCTTGTTGCCATGTGCTCAAGATGTTGCGTGGTGTACCCAAAGTCCTGCATTTGTCAAAGAAATCATCAACAGCAGAGAAACTACATGTCAAGGAATTATTCTTTAGGTTATATCCATTCTTGAAGATTGCATACAAGACCATGAATCAGACCATTATTGAAGCCATGGAACAAGAAAAAGAGATTAATATCCTTGATCTCAGTGCACCTCATGATGCCACTCAATGGATTTATCTTATGCAGAGCTTAAAAGAACATTTACCAAACCCACCACCACCATATCTGAAAATTACAATTACATGTATACATGTGAAGAAGGAGGTGTTGGATCAGATGGGGTTACATTTAAGAATAGAAGCTGAAAGGCTGAATTTCCCTAATTTCCAATTCCATCCTGTTGTGAGCACTTTGGAGAACCTTGACCTTGAAACATTGCCTGTAAAGAAGGGAGGGCCACTTGCAATTAGTTGTGTGTTTCAACTTCACTCTCTTCTGGCAACTGATGAGGTAAATCTCCAAATGAGGAACTCTTACTCACCTGCAGCATCAATGAATCAATATGTACAAATGCTTGGGAAACAGAAGATGATCAATCCAAGTCCTGACTCAGCATTGTTTCCTTTTTCTCTGAGTCCACCTAAGATGGAGTGTTTGCTAAATGTCTTGTGGAAGCTCAATCCTAAAGTGATGATGATTACTGAGCAAGAAGCCAATGTTAATGGGTCTACTTTGACAAAGAGGATGGACAAAGCTTTGCACTTTTATGGCTCATTATTTGATTGCTTGGAATCTTCCTTTTCAAGAACATCAGTAGATAGAACCTTATTGGAGAAGATGTTACTTGGGGAGCAAATAAAGAACATTGTTGCATGTGAAGGAGTTGAGAGAAAGGAGAGGTATGAGAAACTTAAAACATGGATACCAAGGCTTCAATTGGCTGGATTTGGAATGGTACCTGTTAGCTCCAGTGGGATACAACAAGCAAAAAACCTGTTGCAAAGCTATGTACATGGATATCATATTCTTCAGGACAATCAATGCTTGTTTATCTGTTGGAAAGGTAAGCCTCTCTTTTCTGTATCAGCCTGGAGAAGGTGTTAG 1275 0.3961 MDLQEMRMKLIYHLKDCALFTESRDFINADNRLYHISHLASPHGDSIQRVATYFNEALACCHVLKMLRGVPKVLHLSKKSSTAEKLHVKELFFRLYPFLKIAYKTMNQTIIEAMEQEKEINILDLSAPHDATQWIYLMQSLKEHLPNPPPPYLKITITCIHVKKEVLDQMGLHLRIEAERLNFPNFQFHPVVSTLENLDLETLPVKKGGPLAISCVFQLHSLLATDEVNLQMRNSYSPAASMNQYVQMLGKQKMINPSPDSALFPFSLSPPKMECLLNVLWKLNPKVMMITEQEANVNGSTLTKRMDKALHFYGSLFDCLESSFSRTSVDRTLLEKMLLGEQIKNIVACEGVERKERYEKLKTWIPRLQLAGFGMVPVSSSGIQQAKNLLQSYVHGYHILQDNQCLFICWKGKPLFSVSAWRRC 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi135g00018 424 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 14 418 IPR005202 -
Sebi135g00018 424 ProSiteProfiles GRAS family profile. 1 422 IPR005202 -
Sebi135g00018 424 Pfam GRAS domain family 13 422 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi135g00018 Sebi-Chr135 798391 799665 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi135g00018 4 422 GRAS Transcription Factor Family AT1G50420 43.964 2.63e-114 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi135g00018 GRAS 9.4e-97 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi135g00018 - - vra:106778126 483.411