Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi135g00016 ATGGCTCCATCTTCTGTCACTGTTACTGCTCGCTTTCATGAATCCATCACCCGAAATGCGCTTCGCTCCTATCTCGCAGAGTTTATCTCTACTTTCTTCTATGTCATTGTCGTCGTTGGCTCTGGAATGTCCTCAAGGAAGTTGATGCCTGATGCTTCAGTGAATCCAACAAGTTTGCTTGTGGCTGCCATTGCAAATGCTTTTGCATTGTCCTCTGTTCTGTATATAGCATGGGACATCTCTGGTGGACATGTCAATCCGGCTGTGACCTTTGCAATGGCAGTGGGAGGTCACATTAGTGTCCCAACTGCTCTCTTTTATTGGGCTGCTCAATTGATTGCCTCTGTTATGGCTTGCCTTGTTCTCAGGGTCATTGTTGTTGGAATGCATGTGCCAACATACACAATTGCAGAAGAGATGACAGGGTTTGGAGCATCAGTGTTAGAGGCAAGGGACCCAAGGCGTGGTGCATTGAGTGCCACAGGGACACTTGTGGTTGGTTTAATAGCTGGGGCTAATGTGTTGGCTTCAGGACCATTCTCTGGAGGGTCAATGAATCCTGCTTGTGCTTTTGGCTCAGCAGCAATTGCAGGCACTTTCAGGAACCAAGCAGTGTATTGGGTTGGACCCTTGATTGGTGCTGCCATTGCTGGCCTTCTTTATGACAATGTGGTGTTCCCTCTTCAACCCTCACATTCAATTTCAGAAATTGGGGTCTAA 720 0.475 MAPSSVTVTARFHESITRNALRSYLAEFISTFFYVIVVVGSGMSSRKLMPDASVNPTSLLVAAIANAFALSSVLYIAWDISGGHVNPAVTFAMAVGGHISVPTALFYWAAQLIASVMACLVLRVIVVGMHVPTYTIAEEMTGFGASVLEARDPRRGALSATGTLVVGLIAGANVLASGPFSGGSMNPACAFGSAAIAGTFRNQAVYWVGPLIGAAIAGLLYDNVVFPLQPSHSISEIGV 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi135g00016 239 Pfam Major intrinsic protein 18 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi135g00016 239 PANTHER AQUAPORIN-8 12 227 IPR034294 -
Sebi135g00016 239 PRINTS Major intrinsic protein family signature 167 189 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi135g00016 239 PRINTS Major intrinsic protein family signature 22 41 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi135g00016 239 PRINTS Major intrinsic protein family signature 66 90 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi135g00016 239 PRINTS Major intrinsic protein family signature 103 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi135g00016 239 PRINTS Major intrinsic protein family signature 204 224 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi135g00016 239 FunFam Probable aquaporin TIP5-1 6 233 - -
Sebi135g00016 239 ProSitePatterns MIP family signature. 84 92 IPR022357 -
Sebi135g00016 239 Gene3D Glycerol uptake facilitator protein. 5 232 IPR023271 -
Sebi135g00016 239 SUPERFAMILY Aquaporin-like 12 231 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi135g00016 Sebi-Chr135 760140 761886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi135g00016 1 235 Major Intrinsic Protein MIP AT3G47440 61.290 6.42e-103 297