Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi135g00005 ATGGAGGCAGAATTCGATGACCTGGAAATGTCATCTGTGCAGGCTGAAGATGAATTCTCTAGTAATGTGCAAGATGAGTTGCCAACGAGTGACTACTCTGAGGATGAAAGTAATAATACTGATAGTGGGGACTACTCTGAAGGAACTGATGAAGAAGAGGGAGGTGGTGAAGACCGTTCTGAACTTACAAGTATTGATTGTGTGGCTGATTTTGTTAATCTGAACTTTAGGATGATGAGTTCGGATGATTTTCTTAAGCATGACTTCTCGGATCGTGAGGTGGCATTTAAATTCTACAATTGGTATGCAAAAGTGAAAGGTTTTGCAGCACGAAAGGATAGGATTGGGAAAAAAGGTGATATGGTTGTTCGTCAAACTTTTGTTTTCTACAGGATGGGTAAACATGTAGCAAGACCTGAAGGATACAAAAAGGAACCAAAGCGCATACTGAGGTGTGGGTGTAAAGCACTTTGCAAGGTACGATTGAATTTAGAAACACAAAGATGGCAGGTGAAGGAGTTGATTGATGAACACAACCATCGTATGCTGGAAGAGAGGTTCCATGGCATGTTACCTAGGCATAGGAGGATGGATGTAAGTGATATAGTGAAAATGAATGATATGAGGGAAGCTGGGATTGGTACACCGAGTATCTATCAAGCATTTGCTAATCAATCGGGTGGATTTGATAGAGTAGGTTTCAGGGTCCGTGACATGTGGATCCGGGAAATGTACAGCAAAAGAGACATGTGGGCCACTGCTTACCTTAGAGGCACGTTTTTTGCGGGGTTTAGGACCACTTCTCGGTACATCAGGCAAAAAGAGGTAGAGGCTGATTTTGATTCTTCAAATGGTGAACAACTTATACACACGGGCTATCCGCAACTGGAAACTTCGGCATCGTTGATATATACACGTAATGTGTTTCTACTGTTTCGACGCTTCATGGTATTGGCTGCCAAGCTGAAGGTTGTTGGTTGTAAGCGATCGTGTGCATGTGTAATTTACCTAGTGCGAAAGCATGTGGCTGATGAGATTGAGTGGTATGTTACCTTTCATCCTCCAACTAATGGTCTAAAATGCTCATGTAAGCGGATGGAGTCATATGGTCTTCCTTGTGATCATATTTTGGCTGTGATGTTCTTTTTGGATATGAAAGAGGTTCCTAGTTCTATAGTGTTGGAGAGATGGACCAAAAAAGCCAAAGATCTATTTTGGAGAAGCAATAATGTCTCTCCTCAATATCAGCAGTCATTGATGCGGGCTATGTATCAGGGAATGCTTAGAAGTTGTGAAGAAATGTGTGAATTGGTGTGTGCAAGCCGTTTTGGGATATGGAGGATTCCAACATACGTCATGTTAGGGACCCAATTCGGGTTAGGGGAAGGGGGTGTAGTGATAGGCTTACATGTGATGGGGGAATACGTAAACGGAGGCCGCGGTGCAGTAACTGTAGGCGTGAAGGTCATAACAAAACCACATGCCCACTTAGGGGATCTCATGGTAGGAAGCCAGAATAACACCTTTGGTCATGAAACTCAACGAGGCACCCAAGAACGGAATGAGTGTGAATCTTTTAATGATGATGGTCAAATGTTGGAGAGTGAGAATAGTCGTTTATTTTCTGATGACTATGAACAACAGCCCGAGATGGTCACTGAGTCTGAGTCTGAAAGTGATGATGGATTATCGGATAACACAGAAGAAGATTTTCTTGGATGA 1722 0.428 MEAEFDDLEMSSVQAEDEFSSNVQDELPTSDYSEDESNNTDSGDYSEGTDEEEGGGEDRSELTSIDCVADFVNLNFRMMSSDDFLKHDFSDREVAFKFYNWYAKVKGFAARKDRIGKKGDMVVRQTFVFYRMGKHVARPEGYKKEPKRILRCGCKALCKVRLNLETQRWQVKELIDEHNHRMLEERFHGMLPRHRRMDVSDIVKMNDMREAGIGTPSIYQAFANQSGGFDRVGFRVRDMWIREMYSKRDMWATAYLRGTFFAGFRTTSRYIRQKEVEADFDSSNGEQLIHTGYPQLETSASLIYTRNVFLLFRRFMVLAAKLKVVGCKRSCACVIYLVRKHVADEIEWYVTFHPPTNGLKCSCKRMESYGLPCDHILAVMFFLDMKEVPSSIVLERWTKKAKDLFWRSNNVSPQYQQSLMRAMYQGMLRSCEEMCELVCASRFGIWRIPTYVMLGTQFGLGEGGVVIGLHVMGEYVNGGRGAVTVGVKVITKPHAHLGDLMVGSQNNTFGHETQRGTQERNECESFNDDGQMLESENSRLFSDDYEQQPEMVTESESESDDGLSDNTEEDFLG 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi135g00005 573 MobiDBLite consensus disorder prediction 549 573 - -
Sebi135g00005 573 MobiDBLite consensus disorder prediction 528 544 - -
Sebi135g00005 573 Pfam FAR1 DNA-binding domain 97 183 IPR004330 -
Sebi135g00005 573 Pfam SWIM zinc finger 357 380 IPR007527 GO:0008270
Sebi135g00005 573 MobiDBLite consensus disorder prediction 501 573 - -
Sebi135g00005 573 ProSiteProfiles Zinc finger SWIM-type profile. 348 384 IPR007527 GO:0008270
Sebi135g00005 573 PANTHER OS01G0519700 PROTEIN 238 434 - -
Sebi135g00005 573 MobiDBLite consensus disorder prediction 1 61 - -
Sebi135g00005 573 MobiDBLite consensus disorder prediction 14 28 - -
Sebi135g00005 573 SMART 26again6 359 386 IPR006564 GO:0008270
Sebi135g00005 573 MobiDBLite consensus disorder prediction 29 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi135g00005 Sebi-Chr135 568541 571328 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi135g00005 FAR1 1e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi135g00005 - - tpra:123905832 194.897