Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi134g00015 ATGGATTCAGAAGAGAAATTTCTTGCCAAAGTTTCTGGTGTTCAAAGCCTTTCATCCAGTGTACAAAGTACTCCAGAAAAAAATGGCCTTTCAGATGATGCATCAAGAAATTCAGAAATCCTTCAGCAGTTCCTGAAATCTGGTCCAAAGAAGGAACTTCTTCGAACGTGCTTTGAAAAGGACAAAAAGAACACTTCTTTTAAAAGCAGGATGACTGAAACTAAGTCAACTAGTAAAATTATCAAGAAACAGGACTCAAAAAAAGTTTCTGGTCTTAGCAATCAGCCTTCTAAGAAGCAGCATCGCAAAGGTGAAAACCCCATGCGATTCGTACCACCTCCTGACCCGCCTTCTGATTTTGGACATTCAGATTCCTGGATCTGTAAAAATTCTGCGTGTAGAGCGGTTCTATCTAAGGATGACACATTTTGTAGAAGATGCTCTTGCTGTATTTGCCACCTTTTTGATGATAACAAGGATCCTAGTCTTTGGTTGGTATGCACAAGTGAATCTGTTCAAGGGGACTCCTGTGGACTGTCTTGCCACATCGAGTGTGCCCTTCAACATGAAAAAGTGGGAGTTGTTGATCATGGGCAACTGATGCAACTGGATGGTGGTTATTGTTGTGCCTCATGTGGTAAAGTTACTGGGATACTTGGATGTTGGAAGAAGCAGTTAAACATAGCAAAAGATGCTCGTCGTGTAGATGTACTATGTTACAGGATATATTTGAGCTACAGGCTTCTGGATGGGACTTCAAAATTTAAAGAACTGCATGAAACGGTAAAGGAGGCAAAGGCTAAACTGGAGACCGAAGTTGGTCCAGTTAACGGGGTTTCTGCCAAGATGGCACGTGGCATTGTCAGCAGGCTCCCCATTGCCAGTGATGTACAGAAACTCTGCTCTCTTGCTATTGAGAAAGCTGACGAGTGGTTGGCCAATGTTGCCATTGCAAATCCAGAATCCAGAGAAGGTTCACTTCCCGCTGCCTGCAAGTTTGTTTTTGAAGAGGTAACAGCTTCCTCAGTCAAAATCATTTTAATTGAAATGTCAAATGCATCCTCTAAGGACATTAAGGGATACAAGCTCTGGTATTACAAGAGTAGGGATGAATCACATAGTAAAGATCCTGTCTGTGTGTTTCCCAAAGCTCAGAGGAGGATTTTGATATCCAACCTCCAGCCCTGCACAGAATATACCTTTCGGATTATATCTTTCACAGATATGGGTGACCTGGGTCATTCTGAGGCCAAGTGTTTCACCAAGAGCATTGAGATATTGGAAAAAAATCCATCTTCATCAGCTGCCATGAATCATAAAAAGGAGAACCTTCAAACTGGAGGCAATTCTTCTGGCTCCAAAATGGAGCCTGATCCTACAATGGCAGACTCAGGATTTAAGGTTCGAGACCTTGGAAAAATATTGCATCTTGCTTGGGCTCAAGAACAAGGTTGCTTTGAGGGGTTTTGCTGTGCTGATACGAGAACTTGCTGTATGCAAAGTGAAATGATCAAGCCTAATAATCCAGAAGAGAAGTTGCCTCCAGTTTCACGAGGCCTTGATCTAAATGTTGTTTCAGTGCCTGATTTAAATGAAGAACTTACTCCTCCTTTTGAGTCTTCCAGGGATGAAGATAATGGTTGCACTCTGCAGCAGGCTGTTGAGGCAGACGATGATGCTGCTTCTCATGATGTGGGGAAAGATTGTATAGCAAGATCACATGGTAGTGGTGGTTCCCAAACCTGGACACATGGGCCAACTGGAGAAGTGCCAGCTGTTGACTCTCGTGTAGATGCATGTAGGAAAAGAATGGCAAGCACAAATGAAAAGACACTTGATTCTGACAGTACCTTGATAAATGGATCTCCTTTACACGTATCTGATGGTTCATTCTCCTTAGATGAGAATTTTGAGTATTGTGTGAAAGTAATTCGTTGGCTAGAATGTCAGGGTCATATCAAACAGGAATTTAGGTTGAAATTGCTGACATGGTTTAGTTTGAGGGCAACGGAGCAAGAACGTAGGGTGGTTAATACTTTCATCCAAACTCTGAGTGATGATCCAAGTAGTTTGGCAGGGCAATTAGTTGACTCTTTTTCTGATATTATATCCAACAAGAGGCAGAGAAATGGGTTCTGTAATAAGGCTGTGGCATCAAATTAA 2163 0.4221 MDSEEKFLAKVSGVQSLSSSVQSTPEKNGLSDDASRNSEILQQFLKSGPKKELLRTCFEKDKKNTSFKSRMTETKSTSKIIKKQDSKKVSGLSNQPSKKQHRKGENPMRFVPPPDPPSDFGHSDSWICKNSACRAVLSKDDTFCRRCSCCICHLFDDNKDPSLWLVCTSESVQGDSCGLSCHIECALQHEKVGVVDHGQLMQLDGGYCCASCGKVTGILGCWKKQLNIAKDARRVDVLCYRIYLSYRLLDGTSKFKELHETVKEAKAKLETEVGPVNGVSAKMARGIVSRLPIASDVQKLCSLAIEKADEWLANVAIANPESREGSLPAACKFVFEEVTASSVKIILIEMSNASSKDIKGYKLWYYKSRDESHSKDPVCVFPKAQRRILISNLQPCTEYTFRIISFTDMGDLGHSEAKCFTKSIEILEKNPSSSAAMNHKKENLQTGGNSSGSKMEPDPTMADSGFKVRDLGKILHLAWAQEQGCFEGFCCADTRTCCMQSEMIKPNNPEEKLPPVSRGLDLNVVSVPDLNEELTPPFESSRDEDNGCTLQQAVEADDDAASHDVGKDCIARSHGSGGSQTWTHGPTGEVPAVDSRVDACRKRMASTNEKTLDSDSTLINGSPLHVSDGSFSLDENFEYCVKVIRWLECQGHIKQEFRLKLLTWFSLRATEQERRVVNTFIQTLSDDPSSLAGQLVDSFSDIISNKRQRNGFCNKAVASN 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi134g00015 720 MobiDBLite consensus disorder prediction 431 457 - -
Sebi134g00015 720 PANTHER VIN3-LIKE PROTEIN 2-RELATED 17 715 IPR044514 GO:0010048|GO:0040029
Sebi134g00015 720 Gene3D Immunoglobulins 326 424 IPR013783 -
Sebi134g00015 720 CDD FN3 332 411 IPR003961 GO:0005515
Sebi134g00015 720 Pfam PHD - plant homeodomain finger protein 128 246 IPR032881 -
Sebi134g00015 720 MobiDBLite consensus disorder prediction 431 459 - -
Sebi134g00015 720 MobiDBLite consensus disorder prediction 1 36 - -
Sebi134g00015 720 MobiDBLite consensus disorder prediction 12 36 - -
Sebi134g00015 720 MobiDBLite consensus disorder prediction 67 118 - -
Sebi134g00015 720 MobiDBLite consensus disorder prediction 67 86 - -
Sebi134g00015 720 Pfam Fibronectin type III domain 333 413 IPR003961 GO:0005515
Sebi134g00015 720 ProSiteProfiles Fibronectin type-III domain profile. 327 426 IPR003961 GO:0005515
Sebi134g00015 720 SUPERFAMILY Fibronectin type III 334 416 IPR036116 GO:0005515
Sebi134g00015 720 CDD PHD_VIN3_plant 148 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi134g00015 Sebi-Chr134 1026259 1032704 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi134g00015 125 711 PHD Gene Family AT3G24440 50.250 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi134g00015 - - gmx:100780157 1287.71