Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi133g00143 ATGTCGCCGTCGAAGTCACCGGAGAAGTCCGCGTTCTCTCAGACTTGCAGTCTATTGAGCCAATACCTCAAGGAGAAGGGAAGCTTCGGAGACCTTACCCTCGGGATGACATGCAACAACGAAACAAATGGGTCTCCCGAGACATCTTGTCACTCTACAACAACCATGGAGTTGTTCCCTACCAAGGTGACACCACAAAACCTCACAGCCATGGATTTGCTCTCTCCACCCGCCGTTTATCCTCTGCACACTGAGGTTCCAACTTTGGTTAACTCAAGTGCATTTAAGTCTGTGGGCAAGGAGCCTAAAGCTTCACAGTTGACAATCTTTTATGGTGGACAAGTTGTTGTATTTGATGATTTTCCTGCTGACAAAGTGGAGGAGATAATGTCATTGGCCAGAAAAGGAACCTCCCAAAGCCACAACTCCTCTGCATATGCTTACACTCAGAATCAGCCTTCAATGATGATTCCTAATATCAACTCTCAAGCTCCTTCCAGACCAATTGCTAGTGGCTTACCAATTGCTAGGAAAGCTTCACTTCATCGGTTCCTGGAGAAGAGGAAAGATAGAATTGCTGCCAAAGCACCATATCAAACAAACAATCCCGTCTCTGCCCCTAACAAGCCGACTGAATCCATTTCATGGCTCGGGCTAGGTGCAAAATGA 669 0.4679 MSPSKSPEKSAFSQTCSLLSQYLKEKGSFGDLTLGMTCNNETNGSPETSCHSTTTMELFPTKVTPQNLTAMDLLSPPAVYPLHTEVPTLVNSSAFKSVGKEPKASQLTIFYGGQVVVFDDFPADKVEEIMSLARKGTSQSHNSSAYAYTQNQPSMMIPNINSQAPSRPIASGLPIARKASLHRFLEKRKDRIAAKAPYQTNNPVSAPNKPTESISWLGLGAK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi133g00143 222 Pfam tify domain 101 133 IPR010399 -
Sebi133g00143 222 MobiDBLite consensus disorder prediction 192 222 - -
Sebi133g00143 222 MobiDBLite consensus disorder prediction 198 212 - -
Sebi133g00143 222 SMART tify_2 100 135 IPR010399 -
Sebi133g00143 222 Pfam Jas motif 174 199 IPR018467 -
Sebi133g00143 222 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 6 210 IPR040390 -
Sebi133g00143 222 ProSiteProfiles Tify domain profile. 100 135 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi133g00143 Sebi-Chr133 1749156 1751027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi133g00143 8 222 Tify Gene Family AT1G19180 43.750 1.70e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Sebi133g00143 tify 5.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi133g00143 K13464 - gmx:100802800 325.094