Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sebi133g00128 | ATGCAGATGCAGACACTCTCCTTTTGTATTCTACTCTCAGCTTTCTTGCTCTTGTTCCTCTCTCCGCCCTGCGCCACCGCAGGGACACCGCAAGATCTGCTCCGTTCATCGTGCGCTCAGGCGAGGTACCCAACCCTCTGCGTGCAGTCCCTCTCCAACCATGTAGGTTCCTCCATGAAGCCCTTGGACCTCGCTCAAGCCGCCGTCAAGGTCAGCCTCGCTCACGCTCGCACCCTCTCTCTCTACCTCAACACACTTCAACAACAGGCAAGGGCAGCGTCTTCCAGCGACAGGCAGCGAGTTGCGGTGAGTGACTGCGTGGCGCAGATTTCTGACTCGGTGACCGAGTTGAACAGGACGATGAACGAGTTACGACACCTGAAGATGGGAACGTTCCAGTGGCAGATGAGCAACGCCATGACATGGACCAGCACCGCCTTGACTAACGGTAACGCCTGCATCAACGGCTTAAACAGCAGCGAAGTTGACGAGAATCTCAAGGTGGACGTCAAACGAAGGGTGACGGACGTTTCCATGCTCACCAGCAACGCCTTATACCTCATCGATCGCCTCCGTAATAGTAGGAGCAGGAATGGGAAGCCTCGTTCCAATTCCAAAAACTGA | 624 | 0.5545 | MQMQTLSFCILLSAFLLLFLSPPCATAGTPQDLLRSSCAQARYPTLCVQSLSNHVGSSMKPLDLAQAAVKVSLAHARTLSLYLNTLQQQARAASSSDRQRVAVSDCVAQISDSVTELNRTMNELRHLKMGTFQWQMSNAMTWTSTALTNGNACINGLNSSEVDENLKVDVKRRVTDVSMLTSNALYLIDRLRNSRSRNGKPRSNSKN | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sebi133g00128 | 207 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 29 | 193 | IPR035513 | - | |
| Sebi133g00128 | 207 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 11 | 187 | - | - | |
| Sebi133g00128 | 207 | Pfam | Plant invertase/pectin methylesterase inhibitor | 33 | 186 | IPR006501 | GO:0004857 | |
| Sebi133g00128 | 207 | NCBIfam | pectinesterase inhibitor domain | 9 | 191 | IPR006501 | GO:0004857 | |
| Sebi133g00128 | 207 | CDD | PMEI-like_3 | 36 | 191 | - | - | |
| Sebi133g00128 | 207 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 31 | 191 | IPR035513 | - | |
| Sebi133g00128 | 207 | SMART | PMEI_2 | 29 | 187 | IPR006501 | GO:0004857 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sebi133g00128 | Sebi-Chr133 | 1516898 | 1517521 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sebi133g00128 | 33 | 194 | Carbohydrate Esterase | AT3G14310 | 24.848 | 1.24e-12 | 64.3 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sebi133g00128 | - | - | mtr:25494163 | 242.276 |