Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi133g00123 ATGGAGGATGCTGGAGGGTCCAAATTGACTGGAAATTGGCAGATTGCAAGACTAAAGGAAATATTTCAGAAGTGGCAAACTGTGACCCTGGGCTCAAAAGAGTCCAATAGCCATTCTGGTGTGAATCATGGGGGCATATCTCCAATGATTAATAAAAGGTTAACCAATCTTGTGTACTGTGATTCGGATGAAGATAGCTGCTATAGCCCTCAACCACCACATGATGTTCCCAAAGGGTACTTAGCTGTCTATGTAGGACCAGAGCTTCGGAGGTTCATCATTCCCACAAGCTACCTTAGTCACTCTCTGTTCAAAGTGTTGCTGGAAAAGGCTGCTGAGGAATTTGGGTTTGATCAGAGTGGTGGGCTCACCATTCCATGTGAAATTGAGACCTTTAAATACCTCCTGAACTGCATGGAGAGCCATCAGCACCATGATGACAATTCCTCCGGAAACAGAGGAACTGTGGAAGAGTAA 477 0.4507 MEDAGGSKLTGNWQIARLKEIFQKWQTVTLGSKESNSHSGVNHGGISPMINKRLTNLVYCDSDEDSCYSPQPPHDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAAEEFGFDQSGGLTIPCEIETFKYLLNCMESHQHHDDNSSGNRGTVEE 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi133g00123 158 Pfam Auxin responsive protein 67 138 IPR003676 GO:0009733
Sebi133g00123 158 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 55 135 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi133g00123 Sebi-Chr133 1473721 1474399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi133g00123 1 158 Calmodulin-binding Proteins AT3G43120 65.217 3.85e-71 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi133g00123 K14488 - gmx:100795275 280.796