Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi133g00122 ATGGGTAAAGTTGAAAGTGGGGAGACTTTTTTGGCTTCACTAACACTCCTCCTCCTCACTCTCCCATCAGCTACTTCCCAACTCCCCCGTCGAACCATGTTGGATCGACAGCTGGCGGATGCAGAGGACGGCGCCGGTAGAATCGTGAGGGTTCGCAAAGACGGAGGCGGAGACTTCACGACAGTAACGGAGGCCGTTAACAGCATCCCGTCGGGGAACAAACGGCGAGTGGTGATCTGGATCGGGATAGGAGAGTACCGTGAGAAGATCAGGGTGGATCGTTCGAAGCCTTTCGTGACGTTTTATGGTGAAAAGAATAACCACAATATCCCCATCATAACGTACGACGCCACAGCGTTGCAGTATGGGACAGTGGATAGCGCCACCGTCACCGTCGATTCTGATTACTTTGTGGCTGTCAATGTGGCCTTTGTGAACTCATCTCCTATGCCAGATGAAAAGAGCGTGGGAGCACAAGCGTTAGCGATGAGGATATCAGGGGACAAGGCTGCATTCTACAACTGCAAATTCATTGGATTTCAAGATACCTTGTGCGATGACACAGGCAGACATTTCTTCAAGGACTGCTATATCCAAGGCACCTACGATTTCATTTTTGGAAATGGAAAATCATTCTACTTGACAAGTACCATAAAATCAGTTGCCAAGGGTTTGAGTGTGATCACAGCACAGGGTAGGGAAAGCATGACACAAGACACGGGATTCACTTTTGTGCACTGCAACATTACGGGAATTGGTTACATGAACACTTACCTTGGCCGTGCTTGGAAGAGGAGCCCCAGAGTCATTTTTGCCTACACCTATATGGATTCCCTCGTCAATGCCCGAGGATGGACAGTCTACTATGGAGAATATAGGTGCATGGGACCAGGAGCTACTTCCTCTGGCCGTGTCAAATTTCAAAAGATACTATCTTATGAAGAAGCAAAGCCCTTTTTGAGCATGGCTTATATTCATGGACAAAACTGGCTTCTCCCTCCCCCTAACCTAGCTGTGACACAACAATAA 1029 0.483 MGKVESGETFLASLTLLLLTLPSATSQLPRRTMLDRQLADAEDGAGRIVRVRKDGGGDFTTVTEAVNSIPSGNKRRVVIWIGIGEYREKIRVDRSKPFVTFYGEKNNHNIPIITYDATALQYGTVDSATVTVDSDYFVAVNVAFVNSSPMPDEKSVGAQALAMRISGDKAAFYNCKFIGFQDTLCDDTGRHFFKDCYIQGTYDFIFGNGKSFYLTSTIKSVAKGLSVITAQGRESMTQDTGFTFVHCNITGIGYMNTYLGRAWKRSPRVIFAYTYMDSLVNARGWTVYYGEYRCMGPGATSSGRVKFQKILSYEEAKPFLSMAYIHGQNWLLPPPNLAVTQQ 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi133g00122 342 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 41 331 - -
Sebi133g00122 342 Pfam Pectinesterase 50 327 IPR000070 GO:0030599|GO:0042545
Sebi133g00122 342 SUPERFAMILY Pectin lyase-like 46 331 IPR011050 -
Sebi133g00122 342 FunFam Pectinesterase 44 333 - -
Sebi133g00122 342 Gene3D - 45 334 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi133g00122 Sebi-Chr133 1471200 1472549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi133g00122 28 337 Carbohydrate Esterase AT5G07410 52.812 2.72e-121 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi133g00122 K01051 - gmx:100790786 506.138