Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi133g00116 ATGAGTTCCCAGATTGTAGCCCGCATATTGGTTAAGGCTCTCATGGCAATGCCAGCTCCAGACTTCAGCTTGTGTCTCTTTTTGATTCCAGAACGTGTGCAAATGGAGGAGCAGTTCAAGACACTGATTGTTCTGTCTCACTATTTGGAGACAGGAAGGTTTCGGCAGTTCTGGGATGAAGCAGCAAAAAGTCGTCATATAGTTGAAGCTGTGCCAGGATTTGAGCAGGCAATCCAAGGCTATGCGATTCATGTCCTTTCCTTGACTTACCAAAAGGTTCCTAGAACTGTTATAGCTGAGGCTATCAATATAGAGGGTTTATCCTTGGACAAATTCCTTGAACACCAAGTAGCTAACTGTGGTTGGGTTATTGAGAAAAGCCAAGGCAGGGGTCAACTTATTGTCCTTCCTAGAAATGAATTTAATGACCCAGTTTTGAAGAAAAACACTGCAGATAGTGTACCATTGGAGCACATTACTCGCATATTCCCTATTCTTAGCTGA 504 0.4325 MSSQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDEAAKSRHIVEAVPGFEQAIQGYAIHVLSLTYQKVPRTVIAEAINIEGLSLDKFLEHQVANCGWVIEKSQGRGQLIVLPRNEFNDPVLKKNTADSVPLEHITRIFPILS 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi133g00116 167 Pfam CSN8/PSMD8/EIF3K family 3 128 IPR033464 -
Sebi133g00116 167 SUPERFAMILY "Winged helix" DNA-binding domain 72 164 IPR036390 -
Sebi133g00116 167 Gene3D - 63 166 IPR036388 -
Sebi133g00116 167 SUPERFAMILY ARM repeat 3 70 IPR016024 -
Sebi133g00116 167 FunFam Eukaryotic translation initiation factor 3 subunit K 63 166 - -
Sebi133g00116 167 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 1 164 IPR009374 GO:0003743|GO:0005737|GO:0005852
Sebi133g00116 167 Gene3D ARM repeat; domain 1 1 60 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi133g00116 Sebi-Chr133 1371964 1373426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi133g00116 1 167 Eukaryotic Initiation Factors Gene Family AT4G33250 77.246 4.96e-96 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi133g00116 K15028 - gmx:100306445 318.546