Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi133g00106 ATGGCTACTTCATCTGCTAAACTCTTTCTCCTTCTCTTAACAATCTTCTTCTCACATACTTTGGCTGTTAACTCCTCCAAAAATGCTTCTACAACAACATTGCATGCAAACCTCTCTTCCTTAAAATCTTTCTGCAGAACTACCCCATACCCTGAAGCTTGCTTCAATTCATCAAAGCTGACAATCTCAATAACTATAAATCCAAACATCATCAACATCCTTCTTCAGTCCCTCCAAGTAGCAATATCTGAAGCCACAAAACTATCTGATCTATTCAACAATGCTGGATCCTCAAACATCATTGAGAACAAAAGAGGAGCAGTCCAAGACTGTAGAGAACTCCAACAATCCACCTTGACTTCCTTAAAAAGATCAGAATCTGGGGTTCGTTCCCAAAACACAAGGAAGTTAGTTGATGCAAGAGCCTACCTCAGTGCAGCCCTCACCAACAAGAACACATGTCTAGAAAGCTTAGACTCTGCTTCAGGTACCCTGAAGCCAGTTCTAGTGAATTCTGTGATCAACTCTTACAAGCATGTCAGTAATTCTCTTTCAATGCTACCTAAGCCTGAAATGAAGGCTCCCAAAGGACGCAAGAACCGGCGTTTAATGGATGCTCCAACATGGTTGTCAAGCAAAGACCTTCGTTTCTTACAAAGCACTAATGAAGCTCCTGTGCTTGTTGTGGCTACAGATGGAACAGGGAACTTTAGTACCATCACTGAAGCCATCAACTTTGCTCCAAATAACAGCTTTGACAGGACAATAATCTATGTCAAAGAAGGGATATATGAGGAAAATGTGGAAATCCCAAGTTATAAGACAAATATTGTACTGCTTGGAGATGGAAAGGATGTCACTTTCATTACTGGCAATAGAAGTGTCATTGATGGCTGGACCACTTTCAGATCTGCAACTTTAGCGGTATCTGGGGAGGGATTTTTGGCACGTGATATAGCTATTGAGAACAAGGCAGGGCCAGAGAAGCATCAAGCAGTTGCCTTGAGAGTGAATGCAGACTTGACTGCTTTTTACAGGTGTGCCATGTATGGTTTTCAAGACACTGTTTATGTTCACTCCTTTAGACAATTCTATAGAGAGTGTGACATTTTTGGGACCATAGATTTCATATTTGGGAATGCAGCAGTGGTTTTACAGGCATGTAACATAGTGTCTAGAATGCCAATGCCTGGCCAATTCACTGTTATCACTGCACAATCCAGAGATTCCCCTGATGAGGATACTGGCATCTCAATCCAAAACTGTTCAATTTTAGCTACTACTGATTTGTATTCCAGCTCTAGCAGCTTCAAGAGCTACCTTGGGAGGCCATGGAGGGTCTATTCTCGCACTGTTTACCTTCAGTCCTACATTGATATGTTTATTGATCCAACAGGGTGGACAAAATGGAGTGATGATGAAGGCTTGGACACTTTGTATTATGGAGAGTTTGCAAATTATGGGCCTAGTTCAGGGACAGATAAGCGAGTAAAATGGCCTGGGTATCATTTAATGGATTACAATAGTGCCTATAACTTCACAGTCTCAGAGTTCATTATTGGTGATGCTTGGCTTGGGTCAACTTCCTTCCCTTATGATAATGGGATTTAA 1611 0.4153 MATSSAKLFLLLLTIFFSHTLAVNSSKNASTTTLHANLSSLKSFCRTTPYPEACFNSSKLTISITINPNIINILLQSLQVAISEATKLSDLFNNAGSSNIIENKRGAVQDCRELQQSTLTSLKRSESGVRSQNTRKLVDARAYLSAALTNKNTCLESLDSASGTLKPVLVNSVINSYKHVSNSLSMLPKPEMKAPKGRKNRRLMDAPTWLSSKDLRFLQSTNEAPVLVVATDGTGNFSTITEAINFAPNNSFDRTIIYVKEGIYEENVEIPSYKTNIVLLGDGKDVTFITGNRSVIDGWTTFRSATLAVSGEGFLARDIAIENKAGPEKHQAVALRVNADLTAFYRCAMYGFQDTVYVHSFRQFYRECDIFGTIDFIFGNAAVVLQACNIVSRMPMPGQFTVITAQSRDSPDEDTGISIQNCSILATTDLYSSSSSFKSYLGRPWRVYSRTVYLQSYIDMFIDPTGWTKWSDDEGLDTLYYGEFANYGPSSGTDKRVKWPGYHLMDYNSAYNFTVSEFIIGDAWLGSTSFPYDNGI 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi133g00106 536 Gene3D - 220 536 IPR012334 -
Sebi133g00106 536 NCBIfam pectinesterase inhibitor domain 15 187 IPR006501 GO:0004857
Sebi133g00106 536 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 189 IPR035513 -
Sebi133g00106 536 PANTHER PECTINESTERASE 16 526 - -
Sebi133g00106 536 FunFam Pectinesterase 220 536 - -
Sebi133g00106 536 Pfam Plant invertase/pectin methylesterase inhibitor 40 186 IPR006501 GO:0004857
Sebi133g00106 536 CDD PMEI-like_3 43 186 - -
Sebi133g00106 536 ProSitePatterns Pectinesterase signature 2. 370 379 IPR033131 -
Sebi133g00106 536 SUPERFAMILY Pectin lyase-like 223 533 IPR011050 -
Sebi133g00106 536 Pfam Pectinesterase 227 522 IPR000070 GO:0030599|GO:0042545
Sebi133g00106 536 SMART PMEI_2 36 186 IPR006501 GO:0004857
Sebi133g00106 536 FunFam Pectinesterase 37 189 - -
Sebi133g00106 536 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 187 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi133g00106 Sebi-Chr133 1274301 1276373 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi133g00106 33 536 Carbohydrate Esterase AT2G26440 66.281 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi133g00106 - - gmx:100776969 835.869